lib/Interface_ManagerContour_NDimensions/wxContourMainFrame.h

   1 #ifndef __wxContourMainFrame_h_INCLUDED_H__
   2 #define __wxContourMainFrame_h_INCLUDED_H__
   3
   4
   5 // -----------------------------------------------------------------------------------------------------------
   6 // WX headers inclusion.
   7 // For compilers that support precompilation, includes <wx/wx.h>.
   8 // -----------------------------------------------------------------------------------------------------------
   9
  10 #include <wx/wxprec.h>
  11 #ifdef __BORLANDC__
  12 #pragma hdrstop
  13 #endif
  14 #ifndef WX_PRECOMP
  15 #include <wx/wx.h>
  16 #endif
  17
  18
  19 //------------------------------------------------------------------------------------------------------------
  20 // Includes
  21 //------------------------------------------------------------------------------------------------------------
  22 #include "wx/aui/aui.h"
  23
  24 #include "interfMainPanel.h"
  25 #include "KernelManagerContour.h"
  26
  27 //#include "wxVtkBaseView_SceneManager.h"
  28 #include "wxInstantChooserPanel.h"
  29 #include "wxContourViewPanel.h"
  30
  31 //#include "ContourWorkspace.h"
  32 #include "ContourExtractData.h"
  33 #include "PerformingOperation.h"
  34
  35 #include "manualLineControler.h"
  36 #include "manualContourModelLine.h"
  37 #include "manualViewLine.h"
  38
  39 #include "ThresholdImageView.h"
  40 #include "ThresholdImageViewPanel.h"
  41 #include "ColorLayerImageView.h"
  42 #include "ColorLayerImageViewPanel.h"
  43
  44
  45 //ITK
  46 #include "itkImage.h"
  47 #include "itkGeodesicActiveContourLevelSetImageFilter.h"
  48
  49 #include "itkCurvatureAnisotropicDiffusionImageFilter.h"
  50 #include "itkGradientMagnitudeRecursiveGaussianImageFilter.h"
  51 #include "itkSigmoidImageFilter.h"
  52 #include "itkFastMarchingImageFilter.h"
  53 #include "itkRescaleIntensityImageFilter.h"
  54 #include "itkBinaryThresholdImageFilter.h"
  55 #include "itkZeroCrossingImageFilter.h"
  56 #include "itkCastImageFilter.h"
  57
  58 #include "itkImageFileWriter.h"
  59
  60 #include "itkImageToVTKImageFilter.h"
  61 #include "itkVTKImageToImageFilter.h"
  62
  63 //VTK
  64 #include <vtkImageSeedConnectivity.h>
  65 #include <vtkImageMarchingCubes.h>
  66 #include "vtkContourFilter.h"
  67 #include "vtkMarchingContourFilter.h"
  68 #include "vtkPolyDataConnectivityFilter.h"
  69 #include "vtkCleanPolyData.h"
  70 #include "vtkImageReslice.h"
  71 #include "vtkMetaImageWriter.h"
  72 #include "vtkImageData.h"
  73 #include "vtkTransform.h"
  74
  75 #include "vtkCamera.h"
  76 #include "vtkImageActor.h"
  77 #include <vtkImageMapToColors.h>
  78 #include <vtkLookupTable.h>
  79 #include <vtkCommand.h>
  80
  81 //#include "vtkMetaImageReader.h"
  82
  83 //------------------------------------------------------------------------------------------------------------
  84 // Events declaration
  85 //------------------------------------------------------------------------------------------------------------
  86
  87 //BEGIN_DECLARE_EVENT_TYPES()
  88 //END_DECLARE_EVENT_TYPES()
  89
  90 /** file wxContourMainFrame.h */
  91
  92
  93 //------------------------------------------------------------------------------------------------------------
  94 // Class definition
  95 //------------------------------------------------------------------------------------------------------------
  96 class interfMainPanel;
  97 class wxContourMainFrame : public wxPanel {
  98
  99         public:
 100
 101         //------------------------------------------------------------------------------------------------------------
 102         // Constructors & Destructors
 103         //------------------------------------------------------------------------------------------------------------
 104
 105
 106         wxContourMainFrame(wxWindow* parent, wxWindowID id,const wxString& title,const wxPoint& pos,const wxSize& size,long style  = wxDEFAULT_FRAME_STYLE | wxSUNKEN_BORDER);
 107         wxContourMainFrame(wxWindow* parent, wxWindowID id,const wxString& title,const wxPoint& pos,const wxSize& size,std::vector<vtkImageData*> images, long style  = wxDEFAULT_FRAME_STYLE | wxSUNKEN_BORDER,std::string datadir="C:/Creatis/creaContoursBin/RelWithDebInfo/");
 108
 109         ~wxContourMainFrame();
 110
 111         //------------------------------------------------------------------------------------------------------------
 112         // Creational and initialization methods
 113         //------------------------------------------------------------------------------------------------------------
 114
 115         void setVectImages(std::vector<vtkImageData*> imgs);
 116
 117         bool configurePanels( );
 118
 119         bool addNewPanel(wxPanel* panel);
 120
 121         wxAuiNotebook * createNotebook();
 122
 123         void createInstantChooserPanel(wxAuiNotebook * parent);
 124
 125         void createViewPanel(wxAuiNotebook * parent);
 126
 127         void createInstantChooserPanel(wxWindow * parent);
 128
 129         void createViewPanel(wxWindow * parent);
 130
 131         void setInstantChooserPanel(  wxInstantChooserPanel * theInstantChooserPanel );
 132
 133         void getMaskValue(vtkImageData ** mask,vtkImageData ** value,int typeContourGroup, int selection, int minZ, int maxZ);
 134
 135         void SaveImageResult(std::string directory,std::string namefile, vtkImageData* mask,vtkImageData* value);
 136
 137         void ShowToolsPanel(bool show);
 138
 139
 140         ////------------------------------------------------------------------------------------------------------------
 141         //// Methods for capturing events
 142         ////------------------------------------------------------------------------------------------------------------
 143
 144
 145         ////------------------------------------------------------------------------------------------------------------
 146         ////  Model management methods
 147         ////------------------------------------------------------------------------------------------------------------
 148
 149
 150         //------------------------------------------------------------------------------------------------------------
 151         //  Attributes getters and setters
 152         //------------------------------------------------------------------------------------------------------------
 153         static wxContourMainFrame* getInstance(wxWindow* parent, wxWindowID id,const wxString& title,const wxPoint& pos,const wxSize& size,std::vector<vtkImageData*> images, long style  = wxDEFAULT_FRAME_STYLE | wxSUNKEN_BORDER, std::string datadir="C:/Creatis/creaContoursBin/RelWithDebInfo/");
 154         static wxContourMainFrame* getInstance();
 155         static void resetInstance();
 156
 157         //------------------------------------------------------------------------------------------------------------
 158         //  Other functional methods
 159         //------------------------------------------------------------------------------------------------------------
 160
 161         /*
 162         ** This method returns the vector of images selected by the user
 163         **      return value std::vector<vtkImageData*>
 164         */
 165         std::vector<vtkImageData*> getVectImages();
 166
 167         /**
 168         **      This methods connect the event in the class interfMainPanel with the world of the appli
 169         **/
 170         void onCreateContourSpline( );
 171         void onCreateContourRectangle( );
 172         void onCreateContourCircle( );
 173         void onCreateContourLine( );
 174         void onCreateContourPoints( );
 175         void onCreateContourPolygon( );
 176         void onCreateContourBullEye(wxPanel* pan);
 177         /////////////////////////////////
 178         void onDeleteContour();
 179         void deleteContours( std::vector<std::string>  keyNamesVector );
 180         void deleteContour( std::string theKeyName );
 181         void onDeleteContoursActSlice();
 182         void onDeleteAllContours();
 183         void deleteAllContours();
 184         void setConceptValue( std::string name, int value );
 185         ConceptDataWrap* getLastConceptData();
 186         bool getIfConceptCheckedAt( std::string name, int pos );
 187
 188         void changeInstant();
 189
 190         int getNamesWrappingSize();
 191
 192         std::string getNameWrapping(int i);
 193
 194         void updateInstantOutlines();
 195         void updateInstantImageData();
 196         void updateInstantAxes();
 197
 198         void onChangeDeep(int val);
 199
 200 ///////////////////////////
 201         void onCopy();
 202         void onPaste();
 203         void onUndo();
 204         void onRedo();
 205         void createCopyContourOf ( std::string anExistingKName, std::vector<int> &instantNoTouchData, bool append );
 206         void createMirrorContourOf ( std::string anExistingKName, std::vector<int> &instantNoTouchData, bool append );
 207 ///////////////////////7
 208         void onLoad();
 209         void onSave();
 210         void onImport();
 211         void onTest();
 212         void openContours( FILE *pFile, FILE *pFileData, bool staticContour );
 213
 214         void RefreshInterface();
 215
 216         vtkImageData* getImageData();
 217
 218         void onSegmentationOneSlice(int isovalue,int sampling,int method);
 219         void onSegmentationOneSliceITK(wxString distance, wxString sigma, wxString alfa, wxString beta, wxString propagation, wxString iterations, wxString inflation);
 220         void SegmentationOneSlice( int x, int y, int z, int isovalue, int sampling, int method );
 221         void SegmentationOneSliceITK(int x, int y, int z, wxString distance, wxString sigma, wxString alfa, wxString beta, wxString propagation, wxString iterations, wxString inflation);
 222         void Mirror( int x, int y, int z, int isovalue, int sampling, int method );
 223         int  GetImageDataSizeZ();
 224         void GetImageDataRange(double *range);
 225         void onSegmentationAllSlice(int minZ,int maxZ,int isovalue,int sampling,int method);
 226
 227         //AD
 228         void referenceLine();
 229         void refLineHide();
 230         void refLineShow();
 231         void refLineChangeWidth(int width);
 232
 233         //AD
 234         void onMirror();
 235
 236
 237 //====================================================================================================
 238
 239         void showAxis(bool show);
 240         void onRigidPressed();
 241         void onWidthOfContour(double width);
 242         int getColorWindow();
 243         int getWindowLevel();
 244         void onBrigthnessColorWindowLevel(int colorwindow,int windowlevel);
 245         void onInterpolation(bool interpolate);
 246         void onChangeInstant(std::string name,int actual);
 247         void resetAppend();
 248         void onSpreadAdd();
 249         void onSpreadAddAll();
 250         void onSpreadGo(int type);
 251         void getInstantVector(std::vector<int>& tempVector);
 252         std::vector<std::string> getOutlinesName(int slide);
 253
 254         //
 255         //
 256         // @param typeContourGroup - int The operation id (AND,OR,XOR,ALL=3)
 257         //
 258         void onInformationContourLabels(int typeContourGroup,int selection,int minimumZ,int maximumZ,int grayRangeMin, int grayRangeMax);
 259         void onSaveResults(std::string directory,std::string namefile, std::string filename,
 260                 int typeContourGroup, int selection, int minZ, int maxZ, bool XYZValues, bool contourImage, bool statistics);
 261         void SaveValuesXYZ(std::string directory,std::string namefile, int typeContourGroup);
 262         void onChangeInstantInstantPanel(std::string name,int value, int minshow, int maxshow);
 263         void onSnakePressed();
 264         void saveFileWithContoursAutomatique();
 265         void ShowResultImages(int typeContourGroup, int selection, int minZ, int maxZ );
 266         wxPanel *getMaskImageViewPanel(wxWindow *parent);
 267         void SetContourGroup(int contourGroup);
 268         wxPanel *getThresholdImageViewPanel(wxWindow *parent);
 269         wxPanel *getColorLayerImageViewPanel(wxWindow *parent);
 270
 271
 272 //CMRU 17-08-09-----------------------------------------------------------------------------------------------
 273
 274         /**
 275         * Associates the String parameter with the contour
 276         * @param label Label entered by the user
 277         * @param manualBaseModel Currently selected contour
 278         */
 279         void onPrintLabel (wxString label, manualBaseModel* manualModel);
 280
 281         /**
 282         * Calculates the size of the contour received as a parameter. Uses the measure of a pixel in millimeters.
 283         * @param manualBaseModel Currently selected contour
 284         */
 285         void onInsertCalculation(manualBaseModel* manualModel);
 286
 287         /**
 288         * Assigns and returns the value of a pixel in millimeters
 289         @ param value Measure of the pixel in millimeters
 290         */
 291         double onePixelSize(double value);
 292
 293         /**
 294         * Returns the type of the currently selected contour
 295         */
 296         int getType();
 297
 298         /**
 299         * Returns the size in pixels of the currently selected contour
 300         */
 301         double getContourSizeInPixels();
 302
 303         /**
 304         * Returns the currently selected contour. If no contour is selected returns NULL
 305         */
 306         manualBaseModel* getContour();
 307
 308         /**
 309         * Returns the Path of the data persistence file
 310         */
 311         std::string GetFileLocation();
 312
 313         /**
 314         * Assign a new path to the data persistence file
 315         @ param newFileLocation New path of the file
 316         */
 317         void SetFileLocation(std::string newFileLocation);
 318 //------------------------------------------------------------------------------------------------------------
 319
 320         void SetScalarRange(int grayRangeMin, int grayRangeMax);
 321
 322 //------------------------------------------------------------------------------------------------------------
 323
 324 private:
 325         //------------------------------------------------------------------------------------------------------------
 326         //  Private methods
 327         //------------------------------------------------------------------------------------------------------------
 328
 329
 330         //------------------------------------------------------------------------------------------------------------
 331         // Attributtes
 332         //------------------------------------------------------------------------------------------------------------
 333
 334         int _contourGroup;
 335         static wxContourMainFrame   *instance;
 336         KernelManagerContour        *kernelManager;
 337         interfMainPanel             *_pannew;
 338         PerformingOperation         *_performingOperation;
 339         std::string                 _datadir;
 340         wxContourViewPanel          *_theViewPanel;
 341         wxInstantChooserPanel       *_instantPanel;
 342
 343         //AD: 03-09: This attributes represents the reference line that is going to be used for the mirroring
 344         manualLineControler         *_refLineControl;
 345         manualContourModelLine      *_refLineModel;
 346         manualViewLine              *_refLineView;
 347
 348         wxAuiManager                m_mgr;
 349         wxAuiNotebook               *notebook;
 350     long                        m_notebook_style;
 351     long                        m_notebook_theme;
 352     int                         _numberOfVariablesStatistics;
 353
 354         // Contour Image Mask
 355         ThresholdImageView                      *_viewMaskImage;
 356         ThresholdImageViewPanel         *_viewMaskImagePanel;
 357
 358         // Threshold Image
 359         ThresholdImageView                      *_viewThresholdImage;
 360         ThresholdImageViewPanel         *_viewThresholdImagePanel;
 361
 362         // Color Layer Image
 363         ColorLayerImageView                     *_viewColorLayerImage;
 364         ColorLayerImageViewPanel        *_viewColorLayerImagePanel;
 365         std::vector<vtkImageData*>  _images;
 366         bool                        _actorPresent;
 367
 368     // temporary variables readding .roi file
 369     int             _tmpReadFileImageDim[3];
 370         double          _tmpReadFileImageSpac[3];
 371     int             _tmpReadFileTypeOfTransformation;
 372     void readDimSpc(FILE *pFile, bool interactiveOption);
 373
 374
 375         /*DECLARE_CLASS(wxContourMainFrame)
 376         // any class wishing to process wxWindows events must use this macro
 377         DECLARE_EVENT_TABLE()*/
 378         bool                        _creatingContoursActive;
 379 ////////JCP 21 - 11 - 08
 380         void createContour( int typeContour );
 381         //manualContourModel * factoryManualContourModel(int typeContour);
 382         manualBaseModel * factoryManualContourModel(wxPanel* panel);
 383         ContourExtractData              *_contourextractdata;
 384
 385         void saveState();
 386         void loadState(std::string filename);
 387
 388 //      void loadContours( FILE *pFile, bool staticContour );
 389
 390         void saveFileWithContours( std::string filename );
 391         void onLoadContours(std::string fileNameContourROI, bool interactiveInterface);
 392
 393         int                         inredo;
 394         int                         inundo;
 395         std::string                     stundoredo;
 396         static char                 COPY;
 397
 398 //CMRU 17-08-09-----------------------------------------------------------------------------------------------
 399         wxWindow                    *infoWin2;
 400         wxPanel                     *calibrationPanel;
 401         wxPanel                     *calibrationPanelError;
 402         double                      _onePixelSize;
 403         std::string                 _imageLocation;
 404         std::string                 _fileLocation;
 405 //------------------------------------------------------------------------------------------------------------
 406
 407 };
 408
 409 #endif