lib/kernel_ManagerContour_NDimensions/KernelManagerContour.h

   1 /*# ---------------------------------------------------------------------
   2 #
   3 # Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
   4 #                        pour la Sant�)
   5 # Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
   6 # Previous Authors : Laurent Guigues, Jean-Pierre Roux
   7 # CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
   8 #
   9 #  This software is governed by the CeCILL-B license under French law and
  10 #  abiding by the rules of distribution of free software. You can  use,
  11 #  modify and/ or redistribute the software under the terms of the CeCILL-B
  12 #  license as circulated by CEA, CNRS and INRIA at the following URL
  13 #  http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
  14 #  or in the file LICENSE.txt.
  15 #
  16 #  As a counterpart to the access to the source code and  rights to copy,
  17 #  modify and redistribute granted by the license, users are provided only
  18 #  with a limited warranty  and the software's author,  the holder of the
  19 #  economic rights,  and the successive licensors  have only  limited
  20 #  liability.
  21 #
  22 #  The fact that you are presently reading this means that you have had
  23 #  knowledge of the CeCILL-B license and that you accept its terms.
  24 # ------------------------------------------------------------------------ */
  25
  26 #ifndef __KERNELMANAGERCONTOUR__
  27 #define __KERNELMANAGERCONTOUR__
  28
  29
  30
  31 //------------------------------------------------------------------------------------------------------------
  32 // Includes
  33 //------------------------------------------------------------------------------------------------------------
  34 //#include "ImageSourceThing.h"
  35 //#include "ImageSectionThing.h"
  36 //#include "AxeThing.h"
  37 //#include "ContourThing.h"
  38 #include "OutlineModelManager.h"
  39 #include "OutlineModelBuilder.h"
  40 #include "time.h"
  41 #ifdef ParserOsirix_BUILD
  42 #include "OsirixParser.h"
  43 #endif
  44 #include "ContourPropagation.h"
  45
  46 #include "manualContourModel.h"
  47 #include "manualContourModelCircle.h"
  48 #include "manualContourModelLine.h"
  49 #include "manualContourModelRoi.h"
  50 #include "manualContourModelPolygon.h"
  51
  52 #include <vtkImageChangeInformation.h>
  53
  54 class KernelManagerContour{
  55
  56 //------------------------------------------------------------------------------------------------------------
  57 // Constructors & Destructors
  58 //------------------------------------------------------------------------------------------------------------
  59 public:
  60
  61         /**
  62         ** With this constructor the setVectImages and initialize environment must be called
  63         **/
  64         KernelManagerContour();
  65         /**
  66         **      If images are available before the construction of the kernelManager this method should be used
  67         **      it sets the vector images and initializes the environment
  68         **/
  69         KernelManagerContour(std::vector<vtkImageData*> images,std::string datadir,std::string tmpdir);
  70         ~KernelManagerContour();
  71
  72         std::vector<vtkImageData*> getVectImages();
  73         void setVectImages(std::vector<vtkImageData*> vectimg);
  74
  75         void GetSpacing(double *vecspc, int iImage);
  76
  77
  78         /**
  79         **      This method returns the source of the image data selected by the user.
  80         */
  81         vtkImageData* getSourceImage();
  82
  83
  84
  85         void initializeEnvironment(std::string datadir);
  86
  87
  88         /**
  89         **      This methods connect the event in the class interfNewContourMenu with the world of the appli
  90         **/
  91
  92         std::string createOutline(manualBaseModel * manModelContour,std::vector<int> instantVector);
  93         /////////////////////////////////
  94
  95         std::string intToString(int num);
  96
  97         std::vector<std::string> GetLstNameThingsStatic();
  98
  99         void SaveThingName(FILE* pFile, FILE *pFileData, std::string name );
 100
 101         std::vector<std::string> GetLstNameThings();
 102
 103         bool IsPartOfStaticList(std::string keyName );
 104
 105         void deleteCModel(std::string theKeyName);
 106
 107         void removeAllOutlines();
 108
 109         //void setInstance(theInstant);
 110
 111         std::vector<NameWrapper *> getActualInstantOutlines();
 112
 113         int getNamesWrappingSize();
 114
 115         std::string getNameWrapping(int i);
 116
 117         void setInstant(Instant* theInstant);
 118         void setInstant(std::vector<int> vectInstant);
 119         std::string createCopyContourOf ( std::string anExistingKName, std::vector<int> &instantNoTouchData);
 120
 121         Instant * getCurrentInstant();
 122
 123         manualBaseModel* getOutlineByKeyName(std::string cloneName);
 124
 125         bool onRedo(std::string& filename);
 126
 127         bool onUndo(std::string& filename);
 128
 129         bool onUndoSaveFile(std::string& filename);
 130
 131         std::string saveState();
 132
 133         void changeContourOfManager(std::string keyName, Instant *instant);
 134
 135         void resetAppend();
 136
 137         std::string onSpreadAdd( std::vector<double> *vecX, std::vector<double> *vecY, std::vector<double> *vecZ, std::vector<int> instants);
 138
 139         void getMaxMinZ(double *minZ,double *maxZ);
 140
 141         manualBaseModel* GetPoints(int z,int type, std::vector<double>* vecCtrlPointX,std::vector<double>* vecCtrlPointY,std::vector<double>* vecCtrlPointZ, std::string& theName,int typeofcontour, std::vector<int> tempVector);
 142
 143         //
 144         // Method which creates the model associated with the type in parameter. The possible contour types are:
 145         // 0-spline
 146         // 1-spline
 147         // 2-rectangle
 148         // 3-circle
 149         // 4-BullEye
 150         // 5-BullEyeSector
 151         // 6-Line
 152         // 7-Points
 153         // NOTE: The view and the controler are created in the wxVtkBaseView_SceneManager class, configureViewControlTo method
 154         // @param typeContour - int
 155         // @return manualBaseModel - Model created based on the type
 156         manualBaseModel* factoryManualContourModel(int typeContour);
 157
 158         void CalculeSplinePropagation();
 159
 160         std::vector<std::string> getOutlinesNameAtInstant(std::vector<int> tempvector);
 161
 162         std::vector<ContourThing**> getOutlinesAtInstant(Instant* instant );
 163
 164         std::vector<manualBaseModel*> ExploseEachModel( std::vector<manualBaseModel*> lstManConMod );
 165
 166
 167         void getConceptsInformation(std::vector<std::string>& conceptNameVect, std::vector<int>& conceptSizeVect);
 168
 169         vtkImageData* getImageAtInstant(std::vector<int> inst);
 170
 171 //------------------------------------------------------------------------------------------------------------
 172 // Constants
 173 //------------------------------------------------------------------------------------------------------------
 174
 175         void setCurrentFileName(std::string filenam);
 176         std::string getCurrentFileName();
 177
 178         std::string parseOsirixFile(std::string filename);
 179 private:
 180 //------------------------------------------------------------------------------------------------------------
 181 // Attributes
 182 //------------------------------------------------------------------------------------------------------------
 183         std::vector<vtkImageData*>                              vectimages;
 184         std::vector<std::vector<double> >               vectimagesSpacing;
 185
 186         ImageSourceThing                                                *imageSource;
 187
 188         //Instant * _actualInstant;
 189 //Temporary attribute should be removed
 190         OutlineModelManager                                             *modelManager;
 191
 192         std::string                                                             filename;
 193
 194         int                                                                             inredo;
 195         int                                                                             inundo;
 196         int                                                                             _currentIndex;
 197         std::string                                                             stundoredo;
 198         std::string                                                             _datadir;
 199
 200         ContourPropagation                                              *_contourPropagation;
 201
 202         OutlineModelManager                                             *getOutlineModelManager();
 203 };
 204 #endif