src/creaImageIOWxDumpPanel.cpp

   1 /*
   2 # ---------------------------------------------------------------------
   3 #
   4 # Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
   5 #                        pour la Santé)
   6 # Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
   7 # Previous Authors : Laurent Guigues, Jean-Pierre Roux
   8 # CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
   9 #
  10 #  This software is governed by the CeCILL-B license under French law and
  11 #  abiding by the rules of distribution of free software. You can  use,
  12 #  modify and/ or redistribute the software under the terms of the CeCILL-B
  13 #  license as circulated by CEA, CNRS and INRIA at the following URL
  14 #  http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
  15 #  or in the file LICENSE.txt.
  16 #
  17 #  As a counterpart to the access to the source code and  rights to copy,
  18 #  modify and redistribute granted by the license, users are provided only
  19 #  with a limited warranty  and the software's author,  the holder of the
  20 #  economic rights,  and the successive licensors  have only  limited
  21 #  liability.
  22 #
  23 #  The fact that you are presently reading this means that you have had
  24 #  knowledge of the CeCILL-B license and that you accept its terms.
  25 # ------------------------------------------------------------------------
  26 */
  27
  28
  29 #include <creaImageIOWxDumpPanel.h>
  30
  31 #include <creaImageIOGimmick.h>
  32 #include <boost/algorithm/string.hpp>
  33 #if defined(USE_GDCM)
  34 #include <gdcmGlobal.h>
  35 #include <gdcmDictSet.h>
  36 #include "gdcmFile.h"
  37 #include "gdcmDocument.h"
  38 #include "gdcmFileHelper.h"
  39 #endif
  40
  41 #if defined(USE_GDCM2)
  42 #include "gdcmGlobal.h"
  43 #include "gdcmFile.h"
  44 #include "gdcmDictPrinter.h"
  45 #include "gdcmPrinter.h"
  46 #include "gdcmReader.h"
  47 #include "gdcmSmartPointer.h"
  48 #include "gdcmSequenceOfItems.h"
  49 #endif
  50 #include "icons/save.xpm"
  51
  52 namespace creaImageIO
  53 {
  54         // CTor
  55    WxDumpPanel::WxDumpPanel(wxWindow *parent,  std::string i_filename)
  56     : wxDialog(parent, -1,_T("DICOM TAGS"), wxDefaultPosition, wxSize(550,580)), filename(i_filename)
  57    {
  58         int size = 16;
  59         mIcon = new wxImageList(size,size,true);
  60         mIcon->Add(wxBitmap(wxBitmap(wxIcon(save_xpm)).ConvertToImage().Rescale(size, size)));
  61         wxToolBar *mToolBar = new wxToolBar(this,-1,wxDefaultPosition,wxDefaultSize);
  62         mToolBar->AddTool( DUMP_SAVE_ID,_T("Save"), mIcon->GetBitmap(0), _T("Save Dicom Tags in text file"));
  63         mToolBar->Realize();
  64
  65 //EED 2017-09-16 Migration wxWidgets 2.8 to 3.0
  66 #if wxMAJOR_VERSION <= 2
  67         DumpText = new wxTextCtrl( this, wxID_ANY,_T(""), wxPoint(5,30), wxSize(520,510), wxTE_READONLY| wxMac | wxTE_MULTILINE | wxTE_RICH );
  68 #else
  69         DumpText = new wxTextCtrl( this, wxID_ANY,_T(""), wxPoint(5,30), wxSize(520,510), wxTE_READONLY | wxTE_MULTILINE | wxTE_RICH );
  70 #endif
  71
  72         Layout();
  73         Print();
  74         }
  75
  76         // DTor
  77         WxDumpPanel::~WxDumpPanel(){}
  78
  79         ///////////////////////////////////////////////////
  80         /// Display in a control Text all dicom tags
  81         ///////////////////////////////////////////////////
  82         void WxDumpPanel::Print()
  83         {
  84            std::stringstream os;
  85            std::string result = "";
  86            if ( !filename.empty()) // ====== Deal with a single file ======
  87            {
  88
  89 #if defined(USE_GDCM)
  90                    GDCM_NAME_SPACE::File *f = GDCM_NAME_SPACE::File::New();
  91                    f->SetLoadMode(GDCM_NAME_SPACE::LD_ALL);
  92                    f->SetFileName( filename );
  93                    f->SetMaxSizeLoadEntry(0xffff);
  94                    f->Load();
  95                    GDCM_NAME_SPACE::FileHelper *fh = GDCM_NAME_SPACE::FileHelper::New(f);
  96                       f->SetLoadMode(GDCM_NAME_SPACE::LD_NOSEQ |GDCM_NAME_SPACE::LD_NOSHADOW);
  97                    fh->SetPrintLevel( 0 );
  98                    fh->Print(os);
  99
 100                    std::string line;
 101                    while(std::getline(os, line))
 102                    {
 103                           result +=clean(line.c_str());
 104                           result += "\n";
 105                    }
 106
 107
 108 #endif
 109 #if defined(USE_GDCM2)
 110                   gdcm::Reader reader;
 111                   reader.SetFileName( filename.c_str() );
 112                   if (reader.Read())
 113                   {
 114                           gdcm::Printer printer;
 115                           printer.SetFile ( reader.GetFile() );
 116                           printer.SetColor( 0 );
 117                           printer.Print( os );
 118                           result = os.str();
 119                   }
 120
 121
 122
 123         //const gdcm::DataSet& ds = reader.GetFile().GetDataSet();
 124  // // (5400,0100) SQ (Sequence with undefined length #=1)     # u/l, 1 WaveformSequence
 125         // gdcm::Tag twsq(0x5400,0x0100);
 126         // bool btest = ds.FindDataElement( twsq) ;
 127         //const gdcm::DataElement &wsq = ds.GetDataElement( twsq );
 128         // gdcm::SmartPointer<gdcm::SequenceOfItems> sqi = wsq.GetValueAsSQ();
 129         // int num = sqi->GetNumberOfItems();
 130  //
 131  // const gdcm::Item & item = sqi->GetItem(1); // Item start at #1
 132  // const gdcm::DataSet& nestedds = item.GetNestedDataSet();
 133
 134  // // (5400,1004) US 16                                       #   2, 1 WaveformBitsAllocated
 135  // gdcm::Tag twba(0x5400,0x1004);
 136  // if( !nestedds.FindDataElement( twba ) )
 137  //   {
 138  //
 139  //   }
 140  // const gdcm::DataElement &wba= nestedds.GetDataElement( twba );
 141
 142  // //std::cout << wba << std::endl;
 143  // //  (5400,1006) CS [SS]                                     #   2, 1 WaveformSampleInterpretation
 144  // // (5400,1010) OW 00ba\0030\ff76\ff8b\00a2\ffd3\ffae\ff50\0062\00c4\011e\00c2\00ba... # 57600, 1 WaveformData
 145  // gdcm::Tag twd(0x5400,0x1010);
 146  // if( !nestedds.FindDataElement( twd ) )
 147  //   {
 148
 149  //   }
 150  // const gdcm::DataElement &wd = nestedds.GetDataElement( twd );
 151  // const gdcm::ByteValue *bv = wd.GetByteValue();
 152  // size_t len = bv->GetLength();
 153  // int16_t *p = (int16_t*)bv;
 154         //
 155  // size_t npts = len / 2;
 156  // //npts = 10; // DEBUG !
 157  // for(size_t i = 0; i < npts; ++i )
 158  //   {
 159  //   float x;
 160  //   x = (float)p[i];
 161  //   }
 162  ////
 163         //// gdcm::SmartPointer<gdcm::SequenceOfItems> sqi = wsq.GetValueAsSQ();
 164         ////if( !sqi || !sqi->GetNumberOfItems() )
 165  ////   {
 166  ////
 167  ////   }
 168
 169  //// const gdcm::Item & item = sqi->GetItem(1); // Item start at #1
 170  //// const gdcm::DataSet& nestedds = item.GetNestedDataSet();
 171
 172  //// // (5400,1004) US 16                                       #   2, 1 WaveformBitsAllocated
 173  //// gdcm::Tag twba(0x5400,0x1004);
 174  //// if( !nestedds.FindDataElement( twba ) )
 175  ////   {
 176  ////   return 0;
 177  ////   }
 178  //// const gdcm::DataElement &wba= nestedds.GetDataElement( twba );
 179
 180
 181
 182         //        gdcm::DataElement data = reader.GetFile().GetDataSet().GetDataElement(gdcm::Tag(0x5400,0x0100));
 183         //        std::string seq_old_begin = "(fffe,e000) na (Item with undefined length)";
 184         //        std::string seq_new_begin = "<SEQ>";
 185         //        boost::algorithm::replace_all(result, seq_old_begin, seq_new_begin);
 186         //        std::string seq_old_end = "(fffe,e00d)";
 187         //        std::string seq_new_end = "<\\SEQ>";
 188         //        boost::algorithm::replace_all(result, seq_old_end, seq_new_end);
 189                   //seq_old_end = "(fffe,e0dd)";                  boost::algorithm::replace_all(result, seq_old_end, "\n");
 190 #endif
 191                   DumpText->SetValue(crea::std2wx(result));
 192
 193                 }
 194         }
 195
 196
 197         const std::string WxDumpPanel::clean(const std::string &i_line)
 198         {
 199
 200                   if (i_line.substr(4,1) == "|")
 201                            {
 202                                    std::string tag;
 203                                    std::string line;
 204                                    std::string signification;
 205                                    std::string value;
 206                                    std::string resultat;
 207
 208                                    tag = "(" + i_line.substr(0,9) + ")";
 209                                    line =  i_line.substr(14,i_line.size()-10);
 210                                    int pos1 = (int)line.find_first_of("[");
 211                                    int pos2 = (int)line.find_first_of("]");
 212                                    signification = line.substr(pos1+1, pos2-pos1-1);
 213                                    line = line.substr(pos2+1);
 214                                     pos1 = (int)line.find_first_of("[");
 215                                     pos2 = (int)line.find_first_of("]");
 216                                    value = line.substr(pos1+1, pos2-pos1-1);
 217                                    resultat = tag + " " + signification + ": " +value;
 218                                   return resultat;
 219                            }
 220                    else
 221                    {
 222                            return i_line;
 223                    }
 224         }
 225
 226 ///////////////////////////////////////////////////
 227 /// wxEvent to save Dicom Tags in a text file    //
 228 ///////////////////////////////////////////////////
 229         void WxDumpPanel::SaveInfos(wxCommandEvent& event)
 230         {
 231 //EED 2017-09-16 Migration wxWidgets 2.8 to 3.0
 232 #if wxMAJOR_VERSION <= 2
 233         wxFileDialog* FD = new wxFileDialog( 0,_T("Select file"), _T(""), _T(""),
 234                                                crea::std2wx("*.txt"), wxOPEN, wxDefaultPosition);
 235 #else
 236         wxFileDialog* FD = new wxFileDialog( 0,_T("Select file"), _T(""), _T(""),
 237                                                crea::std2wx("*.txt"), wxFD_OPEN, wxDefaultPosition);
 238 #endif
 239         if (FD->ShowModal()==wxID_OK)
 240                 {
 241                         wxBusyCursor busy;
 242                         std::ofstream ofs(crea::wx2std(FD->GetPath()).c_str());
 243                         ofs.clear();
 244                         ofs << crea::wx2std(DumpText->GetValue());;
 245                         ofs.close();
 246                 }
 247                 Close();
 248         }
 249
 250 ////////////////////////////////////////////////////////////
 251 ////////////////////////////////////////////////////////////
 252 BEGIN_EVENT_TABLE(WxDumpPanel, wxDialog)
 253     EVT_TOOL(DUMP_SAVE_ID, WxDumpPanel::SaveInfos)
 254 END_EVENT_TABLE()
 255 }
 256