src/creaImageIOWxSimpleDlg.cpp

   1 /*
   2 # ---------------------------------------------------------------------
   3 #
   4 # Copyright (c) CREATIS (Centre de Recherche en Acquisition et Traitement de l'Image
   5 #                        pour la Santé)
   6 # Authors : Eduardo Davila, Frederic Cervenansky, Claire Mouton
   7 # Previous Authors : Laurent Guigues, Jean-Pierre Roux
   8 # CreaTools website : www.creatis.insa-lyon.fr/site/fr/creatools_accueil
   9 #
  10 #  This software is governed by the CeCILL-B license under French law and
  11 #  abiding by the rules of distribution of free software. You can  use,
  12 #  modify and/ or redistribute the software under the terms of the CeCILL-B
  13 #  license as circulated by CEA, CNRS and INRIA at the following URL
  14 #  http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
  15 #  or in the file LICENSE.txt.
  16 #
  17 #  As a counterpart to the access to the source code and  rights to copy,
  18 #  modify and redistribute granted by the license, users are provided only
  19 #  with a limited warranty  and the software's author,  the holder of the
  20 #  economic rights,  and the successive licensors  have only  limited
  21 #  liability.
  22 #
  23 #  The fact that you are presently reading this means that you have had
  24 #  knowledge of the CeCILL-B license and that you accept its terms.
  25 # ------------------------------------------------------------------------
  26 */
  27
  28 #include "creaImageIOWxSimpleDlg.h"
  29
  30
  31 namespace creaImageIO
  32 {
  33
  34
  35         ///Ctor
  36    WxSimpleDlg::WxSimpleDlg(wxWindow *parent,
  37                             wxString i_title,
  38                             const std::string i_namedescp ,
  39                             const std::string i_namedb)
  40     : wxDialog(parent, -1,_T("SELECT IMAGE(S)"), wxDefaultPosition, wxSize(230,150))
  41    {
  42                 namedescp       = i_namedescp;
  43                 namedb          = i_namedb;
  44
  45            if(!i_title.empty())
  46            {
  47                         this->SetTitle(i_title);
  48            }
  49            // Button to select file(s)
  50            wxButton *fileBut = new wxButton(this, -1,_T("Select a single file"), wxPoint(10,7) );
  51            Connect( fileBut->GetId(), wxEVT_COMMAND_BUTTON_CLICKED , (wxObjectEventFunction) &WxSimpleDlg::OnReadFile );
  52
  53            // Button to select directory
  54            wxButton *directoryBut = new wxButton(this, -1,_T("Select all the files in a directory"), wxPoint(10,40) );
  55            Connect( directoryBut->GetId(), wxEVT_COMMAND_BUTTON_CLICKED , (wxObjectEventFunction) &WxSimpleDlg::OnReadDirectory );
  56
  57            // button to select creaImageIO
  58            wxButton *gimmickBut = new wxButton(this, -1,_T("Select thru Dicom browser"), wxPoint(10,70) );
  59            Connect( gimmickBut->GetId(), wxEVT_COMMAND_BUTTON_CLICKED , (wxObjectEventFunction) &WxSimpleDlg::OnReadGimmick );
  60
  61            /// \TODO  Button to select Bruker directory
  62            bInfo = false;
  63         Layout();
  64
  65         }
  66 //////////////////////////////////////////////////////////////////////
  67 //                                                                  //
  68 //////////////////////////////////////////////////////////////////////
  69           void WxSimpleDlg::OnReadFile(wxCommandEvent& event)
  70           {
  71                   int resultShowModal;
  72 //EED 2017-09-16 Migration wxWidgets 2.8 to 3.0
  73 #if wxMAJOR_VERSION <= 2
  74                   wxFileDialog* fileDlg = new wxFileDialog( 0,  _T("Select file"), _T(""), _T(""), crea::std2wx("*"), wxOPEN |wxFD_MULTIPLE, wxDefaultPosition);
  75 #else
  76                   wxFileDialog* fileDlg = new wxFileDialog( 0,  _T("Select file"), _T(""), _T(""), crea::std2wx("*"), wxFD_OPEN |wxFD_MULTIPLE, wxDefaultPosition);
  77 #endif
  78
  79                     resultShowModal = fileDlg->ShowModal();
  80                         if ( resultShowModal==wxID_OK )
  81                         {
  82                                 wxArrayString wxArray;
  83                                 fileDlg->GetPaths(wxArray);
  84                                 if(wxArray.size() >0)
  85                                 {
  86                                         m_results.clear();
  87                                         infoimage               =       wxArray[0];
  88                                         infoimageSource =       _T("FILE(s)");
  89                                         std::vector<std::string> files;
  90                                         for( int i = 0; i < wxArray.GetCount(); i++)
  91                                         {
  92                                                 files.push_back( crea::wx2std(wxArray[i]));
  93                                         }
  94                                         if( !m_view.readFile(files , m_attrDicomTags , m_resultsDicomAtr , m_results) )
  95                                         {
  96                                                 //TO DO WARNING MESSAGE;
  97                                         }
  98                                 } else {
  99                                         // TO DO WARNING MESSAGES
 100                                 }
 101                         }
 102                   SetReturnCode( resultShowModal );
 103 //               Close();
 104                  EndModal( resultShowModal );
 105           }
 106
 107  //////////////////////////////////////////////////////////////////////
 108 //                                                                                                                                      //
 109 //////////////////////////////////////////////////////////////////////
 110
 111           void WxSimpleDlg::OnReadDirectory(wxCommandEvent &event)
 112           {
 113                   int resultShowModal;
 114              long style = wxDD_DEFAULT_STYLE | wxDD_DIR_MUST_EXIST;
 115                  wxDirDialog* dirDlg = new wxDirDialog( 0, _T("Select the directory to display"), _T(""), style);
 116
 117                  resultShowModal = dirDlg->ShowModal();
 118                  if ( resultShowModal==wxID_OK )
 119                  {
 120                          m_results.clear();
 121                         infoimage               =       dirDlg->GetPath();
 122                         infoimageSource =       _T("DIRECTORY");
 123                         if(! m_view.readDirectory(crea::wx2std(dirDlg->GetPath()) , m_attrDicomTags , m_resultsDicomAtr , m_results))
 124                         {
 125                                 //TO DO WARNING MESSAGE;
 126                         }
 127                  }
 128                  SetReturnCode( resultShowModal );
 129 //               Close();
 130                  EndModal( resultShowModal );
 131           }
 132
 133           //////////////////////////////////////////////////////////////////////
 134 //                                                                                                                                      //
 135 //////////////////////////////////////////////////////////////////////
 136
 137           void WxSimpleDlg::OnReadGimmick(wxCommandEvent &event)
 138           {
 139                   // Run Gimmick
 140                    WxGimmickReaderDialog dlg(0,-1,
 141                                    namedescp,
 142                                    namedb,
 143                                    _T("Select image(s)        - Gimmick! (c)"),
 144                    wxDefaultPosition,
 145                    wxSize(810,750),
 146                    GIMMICK_2D_IMAGE_SELECTION,
 147                    GIMMICK_3D_IMAGE_SELECTION,
 148                    _3D,
 149                                    1);
 150                  dlg.ShowModal();
 151                  if (dlg.GetReturnCode() == wxID_OK)
 152              {
 153 //EED1 2018-08
 154 //EED1                          dlg.stopReading();
 155                         std::vector<creaImageIO::OutStrGimmick> outStrGimmick;
 156                         dlg.getSelected(outStrGimmick, m_attrDicomTags,true,"");
 157                         m_results.clear();
 158                         int size=(int)outStrGimmick.size();
 159                         int ii;
 160 //                      if(!bInfo)
 161 //                      {
 162                                 for (ii=0;ii<size;ii++)
 163                                 {
 164                                         m_results.push_back(outStrGimmick[ii].img);
 165                                         m_resultsDicomAtr.push_back( outStrGimmick[ii].infos );
 166                                 }
 167 //                      } else {
 168 //                              for (ii=0;ii<size;ii++)
 169 //                              {
 170 //                                      m_resultsInfo.push_back(outStrGimmick[ii]);
 171 //                              }
 172 //                      }
 173
 174                         infoimage               =       _T("EED Missing info <void> ???");
 175                         infoimageSource =       _T("GIMMICK");
 176                         dlg.OnExit();
 177                  }
 178                  SetReturnCode( dlg.GetReturnCode() );
 179                  EndModal( dlg.GetReturnCode() );
 180            }
 181
 182 //-----------------------------------------------------------------------------
 183         wxString WxSimpleDlg::getInfoImage()
 184         {
 185                 return infoimage;
 186         }
 187
 188 //-----------------------------------------------------------------------------
 189         wxString WxSimpleDlg::getInfoImageSource()
 190         {
 191                 return infoimageSource;
 192         }
 193
 194  //////////////////////////////////////////////////////////////////////
 195 // Return the results vector                                                                            //
 196 //////////////////////////////////////////////////////////////////////
 197           std::vector<vtkImageData*> WxSimpleDlg::getImagesSelected()
 198           {
 199                   return m_results;
 200           }
 201
 202 //-----------------------------------------------------------------------------
 203         std::vector< std::map<std::string, std::string> >  WxSimpleDlg::getDicomInfoImagesSelected()
 204         {
 205                 return m_resultsDicomAtr;
 206         }
 207
 208 //-----------------------------------------------------------------------------
 209         void WxSimpleDlg::SetAttrDicomTags( std::vector<std::string> attr )
 210         {
 211                 m_attrDicomTags=attr;
 212         }
 213
 214
 215 //-----------------------------------------------------------------------------
 216         vtkImageData*  WxSimpleDlg::getVolumeSelected()
 217         {
 218                 vtkImageData *result;
 219
 220 //        creaImageIO::WxSimpleDlg dlg(0,crea::std2wx(bbGetInputTitle()),"localdatabase_Descriptor.dscp","Local Database");
 221 //              dlg.SetAttrDicomTags( bbGetInputDicomTags() );
 222 //              dlg.ShowModal();
 223 //              bbSetOutputDicomInfo( dlg.getDicomInfoImagesSelected() );
 224
 225                 if (getImagesSelected().size()!=0){
 226 //                bbSetOutputFileName( std::string( dlg.getInfoImage().mb_str() ) );
 227                   if(getImagesSelected().size() ==1)
 228                   {
 229                         result = getImagesSelected()[0] ;
 230                   } else {
 231                                 // FCY: it will be a big problem if we have several kind of data in the same folder.
 232                                 // creation of a huge vtkImageData!!!!
 233                                 vtkImageData* first = getImagesSelected()[0];
 234                                 int dim[3];
 235                                 first->GetDimensions(dim);
 236                                 if (dim[2]==1)
 237                                 {
 238                                         vtkImageData *out = vtkImageData::New();
 239                                         int ext[6];
 240 //EED 2017-01-01 Migration VTK7
 241 #if VTK_MAJOR_VERSION <= 5
 242                                         first->GetWholeExtent(ext);
 243 #else
 244                                         first->GetExtent(ext);
 245 #endif
 246                                         if(ext[5] == 0)
 247                                         {
 248                                            ext[5] = getImagesSelected().size()-1;
 249                                          } else {
 250                                                 ext[5] = ext[5] * getImagesSelected().size()-1; // to deal with multiframes
 251                                         } // ext
 252                                         out->SetExtent(ext);
 253                                         double spac[3];
 254                                         first->GetDimensions(dim);
 255                                         first->GetSpacing(spac);
 256                                         if (spac[0]==spac[1])
 257                                         {
 258                                                 spac[2]=spac[0];
 259                                 }
 260                                         out->SetSpacing(spac);
 261                                         out->SetDimensions(dim[0], dim[1], getImagesSelected().size() );
 262 //EED 2017-01-01 Migration VTK7
 263 #if VTK_MAJOR_VERSION <= 5
 264
 265                                         out->SetScalarType(first->GetScalarType());
 266                                         out->SetNumberOfScalarComponents(first->GetNumberOfScalarComponents());
 267                                         out->AllocateScalars();
 268                                         out->Update();
 269 #else
 270                                         out->AllocateScalars(first->GetScalarType(),first->GetNumberOfScalarComponents());
 271 #endif
 272
 273
 274                                         unsigned long imsize = dim[0] * dim[1];
 275                                         imsize = imsize * dim[2];  // deal with multiframes here
 276                                         // differents formats char , short, etc...
 277                                         // differents components 1..3  ex. jpg ->RGB 3
 278                                         imsize = imsize * first->GetScalarSize() * first->GetNumberOfScalarComponents();
 279                                 int slice,sizeImageVector=getImagesSelected().size();
 280                                         for (slice=0 ; slice<sizeImageVector ; slice++)
 281                                         {
 282                                                 vtkImageData *img = getImagesSelected()[slice];
 283                                                 memcpy(out->GetScalarPointer(0,0,slice), img->GetScalarPointer(0,0,0), imsize);
 284                                                 //img->Delete();
 285                                         } // for slice
 286                                         out->Modified();
 287 //EED This is NOT working. The iteration over the pointer vtkImageData
 288 //                              int slice=0;
 289 //                              std::vector<vtkImageData*>::iterator it;
 290 //                              for (it=dlg.getImagesSelected().begin(); it!=dlg.getImagesSelected().end(); ++it)
 291 //                                      {
 292 //                                                memcpy(out->GetScalarPointer(0,0,slice), (*it)->GetScalarPointer(0,0,0), imsize);
 293 //                                                slice++;
 294 //                                      }
 295 //                              //for (it=dlg.getImagesSelected().begin(); it!=dlg.getImagesSelected().end(); ++it)
 296 //                                      //{
 297 //                                      //              (*it)->Delete();
 298 //                                      //}
 299
 300                                         result =out;
 301
 302                                 } else {
 303                                         result = first;
 304                                 } // dim
 305                         } // if getImagesSelected size
 306                 } else {
 307                 result = NULL;
 308                 } // getImagesSelected().size()!=0
 309
 310                         result->Modified();
 311                 return result;
 312
 313                 }
 314
 315
 316
 317 } // namespace creaImageIO
 318