#No Swap Info
#------------
testWrite mr176621.dcm r;
-affim filein=mr176621.dcm.raw DIMX=512 DIMY=512 nbit=16
+affim filein=mr176621.dcm.RAW DIMX=512 DIMY=512 nbit=16
# No Transfert Syntax
#--------------------
+#Big Endian
testWrite cr172241.dcm r;
-affim filein=cr172241.dcm.raw DIMX=1792 DIMY=2392 nbit=16 zoom=-4
+affim filein=cr172241.dcm.RAW DIMX=1792 DIMY=2392 nbit=16 zoom=-4
+#0008,0200 (image location) wrongly stored
+#0028,3006 (LUT Data) has a CTX VR
-testWrite cr_45031.dcm r
-affim filein=cr_45031.dcm.raw DIMX=1670 DIMY=2010 nbit=16 zoom=-4
+testWrite cr_45031.dcm r;
+affim filein=cr_45031.dcm.RAW DIMX=1670 DIMY=2010 nbit=16 zoom=-4
-testWrite CR-MONO1-10-chest.dcm r
-affim filein=CR-MONO1-10-chest.dcm.raw DIMX=440 DIMY=440 nbit=16
+testWrite CR-MONO1-10-chest.dcm r;
+affim filein=CR-MONO1-10-chest.dcm.RAW DIMX=440 DIMY=440 nbit=16
-testWrite CT-MONO2-12-lomb-an2.acr2 r
-affim filein=CT-MONO2-12-lomb-an2.acr2.raw DIM=512 nbit=16
+testWrite CT-MONO2-12-lomb-an2.acr2 r;
+affim filein=CT-MONO2-12-lomb-an2.acr2.RAW DIM=512 nbit=16
-testWrite gdcm-MR-SIEMENS-16.acr1 r
-affim filein=gdcm-MR-SIEMENS-16.acr1.raw DIMX=256 DIMY=256 nbit=16
+testWrite gdcm-MR-SIEMENS-16.acr1 r;
+affim filein=gdcm-MR-SIEMENS-16.acr1.RAW DIMX=256 DIMY=256 nbit=16
-testWrite gdcm-MR-SIEMENS-16.acr2 r
-affim filein=gdcm-MR-SIEMENS-16.acr2.raw DIMX=512 DIMY=512 nbit=16
+testWrite gdcm-MR-SIEMENS-16.acr2 r;
+affim filein=gdcm-MR-SIEMENS-16.acr2.RAW DIMX=512 DIMY=512 nbit=16
-testWrite MR-MONO2-12-an2.acr2 r
-affim filein=MR-MONO2-12-an2.acr2.raw DIMX=256 DIMY=256 nbit=16
+testWrite MR-MONO2-12-an2.acr2 r;
+affim filein=MR-MONO2-12-an2.acr2.RAW DIMX=256 DIMY=256 nbit=16
-testWrite newACR1000.nema r # == gdcmMR-SIEMENS-16.acr2
-affim filein=newACR1000.nema.raw DIMX=512 DIMY=512 nbit=16
+testWrite newACR1000.nema r; # == gdcmMR-SIEMENS-16.acr2
+affim filein=newACR1000.nema.RAW DIMX=512 DIMY=512 nbit=16
-testWrite oldACR00001.ima r # == gdcm-MR-SIEMENS.16.acr1
-affim filein=oldACR00001.ima.raw DIMX=256 DIMY=256 nbit=16
+testWrite oldACR00001.ima r; # == gdcm-MR-SIEMENS.16.acr1
+affim filein=oldACR00001.ima.RAW DIMX=256 DIMY=256 nbit=16
-testWrite OT-MONO2-8-a7.dcm r
-affim filein=OT-MONO2-8-a7.dcm.raw DIMX=512 DIMY=512
+testWrite OT-MONO2-8-a7.dcm r;
+affim filein=OT-MONO2-8-a7.dcm.RAW DIMX=512 DIMY=512
#No Samples Per Pixel
#--------------------
-testWrite gdcm-CR-DCMTK-16-NonSamplePerPix.dcm r
-affim filein=gdcm-CR-DCMTK-16-NonSamplePerPix.dcm dim=750 nbit=8
+testWrite gdcm-CR-DCMTK-16-NonSamplePerPix.dcm r;
+affim filein=gdcm-CR-DCMTK-16-NonSamplePerPix.dcm.RAW dim=750 nbit=8
#Unnormalized Rectangular LibIDO format image
#--------------------------------------------
-testWrite gdcm-ACR-LibIDO.acr r
-affim filein=gdcm-ACR-LibIDO.acr.raw dimx=512 dimy=301
+testWrite gdcm-ACR-LibIDO.acr r;
+affim filein=gdcm-ACR-LibIDO.acr.RAW dimx=512 dimy=301
#Bits Allocated =12, Bits Stored=12
#----------------------------------
#MR Philips (once upon a time in Lyon-Sud)
-testWrite MR-MONO2-12-angio-an1.acr1 r
-affim filein=MR-MONO2-12-angio-an1.acr1.raw dim=256 nbit=16
+testWrite MR-MONO2-12-angio-an1.acr1 r;
+affim filein=MR-MONO2-12-angio-an1.acr1.RAW dim=256 nbit=16
#RGB
#---
-testWrite US.3405.1.dcm r
+testWrite US.3405.1.dcm r;
echo "expected pixelType=8U SamplesPerPixel=1 PlanarConfiguration=0"
echo " PhotometricInterpretation=RGB"
-affim filein=US.3405.1.dcm.raw DIMX=768 DIMY=576 nbit=24
+affim filein=US.3405.1.dcm.RAW DIMX=768 DIMY=576 nbit=24
-testWrite OT-PAL-8-face.dcm r
+testWrite OT-PAL-8-face.dcm r;
echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=1"
echo " PhotometricInterpretation=PALETTE COLOR"
-affim filein=OT-PAL-8-face.dcm.raw dimx=640 dimy=480 nbit=24
+affim filein=OT-PAL-8-face.dcm.RAW dimx=640 dimy=480 nbit=24
-testWrite 8BitsUncompressedColor.dcm r
-affim filein=8BitsUncompressedColor.dcm.raw dimx=800 dimy=535 nbit=24
+testWrite 8BitsUncompressedColor.dcm r;
+affim filein=8BitsUncompressedColor.dcm.RAW dimx=800 dimy=535 nbit=24
# Implicit VR - Little Endian
#-----------------------------
-testWrite CT-MONO2-16-ankle.dcm r
- affim filein=CT-MONO2-16-ankle.dcm.raw DIMX=512 DIMY=512 nbit=16 signe=o
+testWrite CT-MONO2-16-ankle.dcm r;
+ affim filein=CT-MONO2-16-ankle.dcm.RAW DIMX=512 DIMY=512 nbit=16 signe=o
-testWrite CT-MONO2-16-ort.dcm r
-affim filein=CT-MONO2-16-ort.dcm.raw DIMX=512 DIMY=512 nbit=16 signe=o
+testWrite CT-MONO2-16-ort.dcm r;
+affim filein=CT-MONO2-16-ort.dcm.RAW DIMX=512 DIMY=512 nbit=16 signe=o
-testWrite CT-MONO2-8-abdo.dcm r
-affim filein=CT-MONO2-8-abdo.dcm.raw DIMX=512 DIMY=512
+testWrite CT-MONO2-8-abdo.dcm r;
+affim filein=CT-MONO2-8-abdo.dcm.RAW DIMX=512 DIMY=512
-testWrite gdcm-MR-PHILIPS-16.dcm r
-affim filein=gdcm-MR-PHILIPS-16.dcm.raw DIMX=256 DIMY=256 nbit=16
+testWrite gdcm-MR-PHILIPS-16.dcm r;
+affim filein=gdcm-MR-PHILIPS-16.dcm.RAW DIMX=256 DIMY=256 nbit=16
-testWrite MR-MONO2-16-head.dcm r
-affim filein=MR-MONO2-16-head.dcm.raw dim=256 nbit=16 signe=o
+testWrite MR-MONO2-16-head.dcm r;
+affim filein=MR-MONO2-16-head.dcm.RAW dim=256 nbit=16 signe=o
-testWrite multiframe1Integris.dcm r
-affim filein=multiframe1Integris.dcm.raw dim=1024 nbit=16 zoom=-2
-affim filein=multiframe1Integris.dcm.raw dim=1024 nbit=16 offset=31457280 zoom=-2
+testWrite multiframe1Integris.dcm r;
+affim filein=multiframe1Integris.dcm.RAW dim=1024 nbit=16 zoom=-2
+affim filein=multiframe1Integris.dcm.RAW dim=1024 nbit=16 offset=31457280 zoom=-2
-testWrite multiframe2GE.dcm r
-affim filein=multiframe2GE.dcm.raw dim=512
-affim filein=multiframe2GE.dcm.raw dim=512 offset=14417920
+testWrite multiframe2GE.dcm r;
+affim filein=multiframe2GE.dcm.RAW dim=512
+affim filein=multiframe2GE.dcm.RAW dim=512 offset=14417920
-testWrite irmPhlipsNew1.dcm r # == gdcm-MR-PHILIPS-16.dcm
-affim DIMX=256 DIMY=256 filein=irmPhlipsNew1.dcm.raw nbit=16
+testWrite irmPhlipsNew1.dcm r; # == gdcm-MR-PHILIPS-16.dcm
+affim DIMX=256 DIMY=256 filein=irmPhlipsNew1.dcm.RAW nbit=16
#avec imagette (icone)
-testWrite icone.dcm r
-echo "Hopeless till we stop considering the Tag as an identifier inside the Header"
-echo "The Tag is an identifier inside the *Dicom Dictionnary* only"
+testWrite icone.dcm r;
affim filein=icone.dcm bypassacr=1 dim=512 nbit=16 offset=18240
affim filein=icone.dcm dim=64 offset=13984 bypassacr=1
-affim filein=icone.dcm.raw dim=512 nbit=16
+affim filein=icone.dcm.RAW dim=512 nbit=16
#Palette
#Explicit VR - Little Endian
#----------------------------
-testWrite CT-MONO2-16-brain.dcm r
-affim filein=CT-MONO2-16-brain.dcm.raw DIMX=512 DIMY=512 nbit=16 signe=o
+testWrite CT-MONO2-16-brain.dcm r;
+affim filein=CT-MONO2-16-brain.dcm.RAW DIMX=512 DIMY=512 nbit=16 signe=o
-testWrite gdcm-MR-PHILIPS-16-Multi-Seq.dcm r
-affim filein=gdcm-MR-PHILIPS-16-Multi-Seq.dcm.raw DIMX=128 DIMY=128 nbit=16
+# 7 'first level' SeQuences , 140 'second level' SeQuences ?!?
+testWrite gdcm-MR-PHILIPS-16-Multi-Seq.dcm r;
+affim filein=gdcm-MR-PHILIPS-16-Multi-Seq.dcm.RAW DIMX=128 DIMY=128 nbit=16
+PrintHeader gdcm-MR-PHILIPS-16-Multi-Seq.dcm 2
-testWrite gdcm-MR-PHILIPS-16-NonRectPix.dcm r
-affim filein=gdcm-MR-PHILIPS-16-NonRectPix.dcm.raw DIMX=160 DIMY=64 nbit=16
+testWrite gdcm-MR-PHILIPS-16-NonRectPix.dcm r;
+affim filein=gdcm-MR-PHILIPS-16-NonRectPix.dcm.RAW DIMX=160 DIMY=64 nbit=16
-testWrite MR-MONO2-8-16x-heart.dcm r
-affim filein=MR-MONO2-8-16x-heart.dcm.raw DIMX=256 DIMY=256
+testWrite MR-MONO2-8-16x-heart.dcm r;
+affim filein=MR-MONO2-8-16x-heart.dcm.RAW DIMX=256 DIMY=256
-testWrite NM-MONO2-16-13x-heart.dcm r
-affim filein=NM-MONO2-16-13x-heart.dcm.raw DIMX=64 DIMY=64 nbit=16
-affim filein=NM-MONO2-16-13x-heart.dcm.raw DIMX=64 DIMY=64 nbit=16 offset=98304
+testWrite NM-MONO2-16-13x-heart.dcm r;
+affim filein=NM-MONO2-16-13x-heart.dcm.RAW DIMX=64 DIMY=64 nbit=16
+affim filein=NM-MONO2-16-13x-heart.dcm.RAW DIMX=64 DIMY=64 nbit=16 offset=98304
-testWrite sonataMonaco.dcm r
-affim filein=sonataMonaco.dcm.raw DIMX=256 DIMY=208 nbit=16
+testWrite sonataMonaco.dcm r;
+affim filein=sonataMonaco.dcm.RAW DIMX=256 DIMY=208 nbit=16
#MultiFrame
-testWrite US-MONO2-8-8x-execho.dcm r
-affim filein=US-MONO2-8-8x-execho.dcm.raw DIMX=128 DIMY=120
-affim filein=US-MONO2-8-8x-execho.dcm.raw DIMX=128 DIMY=120 offset=92160
+testWrite US-MONO2-8-8x-execho.dcm r;
+affim filein=US-MONO2-8-8x-execho.dcm.RAW DIMX=128 DIMY=120
+affim filein=US-MONO2-8-8x-execho.dcm.RAW DIMX=128 DIMY=120 offset=92160
#RGB
-testWrite US-RGB-8-epicard.dcm r
+testWrite US-RGB-8-epicard.dcm r;
echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=1"
echo " PhotometricInterpretation=RGB"
-affim filein=US-RGB-8-epicard.dcm.raw dimx=640 dimy=480 nbit=24
+affim filein=US-RGB-8-epicard.dcm.RAW dimx=640 dimy=480 nbit=24
-testWrite US-RGB-8-esopecho.dcm r
+testWrite US-RGB-8-esopecho.dcm r;
echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=0"
echo " PhotometricInterpretation=RGB"
-affim filein=US-RGB-8-esopecho.dcm.raw dimx=256 dimy=120 nbit=24
+affim filein=US-RGB-8-esopecho.dcm.RAW dimx=256 dimy=120 nbit=24
# Non-Hierarchical, First-Order Prediction (Process 14 [Selection Value 1])
#--------------------------------------------------------------------------
# (JPEG Lossless)
testWrite CT-MONO2-16-chest.dcm r;
-affim filein=CT-MONO2-16-chest.dcm.raw dimx=512 dimy=400 nbit=16 signe=o
+affim filein=CT-MONO2-16-chest.dcm.RAW dimx=512 dimy=400 nbit=16 signe=o
-testWrite 012345.002.050.dcm r
-affim filein=012345.002.050.dcm.raw dim=256 nbit=16
+testWrite 012345.002.050.dcm r;
+affim filein=012345.002.050.dcm.RAW dim=256 nbit=16
testWrite gdcm-JPEG-LossLess3a.dcm r;
-affim filein=gdcm-JPEG-LossLess3a.dcm.raw dim=512 nbit=16
+affim filein=gdcm-JPEG-LossLess3a.dcm.RAW dim=512 nbit=16
testWrite XA-MONO2-8-12x-catheter.dcm r;
-affim filein=XA-MONO2-8-12x-catheter.dcm.raw dim=512;
-affim filein=XA-MONO2-8-12x-catheter.dcm.raw dim=512 offset=262144
-affim filein=XA-MONO2-8-12x-catheter.dcm.raw dim=512 offset=2883584
+affim filein=XA-MONO2-8-12x-catheter.dcm.RAW dim=512;
+affim filein=XA-MONO2-8-12x-catheter.dcm.RAW dim=512 offset=262144
+affim filein=XA-MONO2-8-12x-catheter.dcm.RAW dim=512 offset=2883584
testWrite xa_integris.dcm r;
echo "a lot of fragments expected here"
-affim filein=xa_integris.dcm.raw dim=512
-affim filein=xa_integris.dcm.raw dim=512 offset=13107200
-affim filein=xa_integris.dcm.raw dim=512 offset=19660800
+affim filein=xa_integris.dcm.RAW dim=512
+affim filein=xa_integris.dcm.RAW dim=512 offset=13107200
+affim filein=xa_integris.dcm.RAW dim=512 offset=19660800
-testWrite 16BitsJpegLosslessGrayScale.dcm r
-affim filein=16BitsJpegLosslessGrayScale.dcm.raw DIMX=800 DIMY=535 nbit=16
+testWrite 16BitsJpegLosslessGrayScale.dcm r;
+affim filein=16BitsJpegLosslessGrayScale.dcm.RAW DIMX=800 DIMY=535 nbit=16
#comming from GE dlx via VTServer
-testWrite I9000001.dcm r
-affim filein=I9000001.dcm.raw dim=512
-affim filein=I9000001.dcm.raw dim=512 offset=7864320
+testWrite I9000001.dcm r;
+affim filein=I9000001.dcm.RAW dim=512
+affim filein=I9000001.dcm.RAW dim=512 offset=7864320
#JPEG Extended (Process 2 & 4) // 16 bits
#-----------------------------
testWrite gdcm-JPEG-Extended.dcm r;
-affim filein=gdcm-JPEG-Extended.dcm.raw dim=512 nbit=16
+affim filein=gdcm-JPEG-Extended.dcm.RAW dim=512 nbit=16
testWrite jpeglossy1.dcm r;
-affim filein=jpeglossy1.dcm.raw dim=512 nbit=16
+affim filein=jpeglossy1.dcm.RAW dim=512 nbit=16
#JPEG Baseline (Process 14)
#--------------------------
-testWrite MR-MONO2-12-shoulder.dcm r
-affim filein=MR-MONO2-12-shoulder.dcm.raw DIMX=1024 DIMY=1024 nbit=16
+testWrite MR-MONO2-12-shoulder.dcm r;
+affim filein=MR-MONO2-12-shoulder.dcm.RAW DIMX=1024 DIMY=1024 nbit=16
#fichier format ecat.
#JPEG Baseline (Process 1)
#-------------------------
# Bracco Files
-testWrite US.1.2.dcm r
+testWrite US.1.2.dcm r;
echo "expected : A lot of Fragments (40), nb Frames = 40 ;-)"
echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=0"
echo " PhotometricInterpretation=YBR_FULL_422"
-affim filein=US.1.2.dcm.raw DIMX=768 DIMY=576 nbit=24
-affim filein=US.1.2.dcm.raw DIMX=768 DIMY=576 nbit=24 offset=13271040
-affim filein=US.1.2.dcm.raw DIMX=768 DIMY=576 nbit=24 offset=39813120
+affim filein=US.1.2.dcm.RAW DIMX=768 DIMY=576 nbit=24
+affim filein=US.1.2.dcm.RAW DIMX=768 DIMY=576 nbit=24 offset=13271040
+affim filein=US.1.2.dcm.RAW DIMX=768 DIMY=576 nbit=24 offset=39813120
#Sequoia Acusson U11
-testWrite CLIP0001-Sequoia-U11.dcm r
-affim filein=CLIP0001-Sequoia-U11.dcm.raw DIMX=768 DIMY=576 nbit=24
-affim filein=CLIP0001-Sequoia-U11.dcm.raw DIMX=768 DIMY=576 nbit=24 offset=1327104
-affim filein=CLIP0001-Sequoia-U11.dcm.raw DIMX=768 DIMY=576 nbit=24 offset=13271040
-affim filein=CLIP0001-Sequoia-U11.dcm.raw DIMX=768 DIMY=576 nbit=24 offset=26542080
+testWrite CLIP0001-Sequoia-U11.dcm r;
+echo "Troubles with 0018|6022[SL][Reference Pixel Y(0)] [4294967177] x(7fffffff)"
+
+affim filein=CLIP0001-Sequoia-U11.dcm.RAW DIMX=768 DIMY=576 nbit=24
+affim filein=CLIP0001-Sequoia-U11.dcm.RAW DIMX=768 DIMY=576 nbit=24 offset=1327104
+affim filein=CLIP0001-Sequoia-U11.dcm.RAW DIMX=768 DIMY=576 nbit=24 offset=13271040
+affim filein=CLIP0001-Sequoia-U11.dcm.RAW DIMX=768 DIMY=576 nbit=24 offset=26542080
#RLE Lossless
#-------------
-testWrite canadaAloka.dcm r
+testWrite canadaAloka.dcm r;
echo "expected pixelType=8U SamplesPerPixel=1"
echo " PlanarConfiguration=0 PhotometricInterpretation=MONOCHROME2"
echo " nb Frames (DIMZ) : 1"
-affim filein=canadaAloka.dcm.raw DIMX=608 DIMY=420
+affim filein=canadaAloka.dcm.RAW DIMX=608 DIMY=420
-testWrite FMAG0001.dcm r
+testWrite FMAG0001.dcm r;
echo "expected pixelType=8U SamplesPerPixel=3"
echo " PlanarConfiguration=1 PhotometricInterpretation=YBR_FULL"
echo " nb Frames (DIMZ) : 1"
-affim filein=FMAG0001.dcm.raw DIMX=768 DIMY=576 nbit=24
+affim filein=FMAG0001.dcm.RAW DIMX=768 DIMY=576 nbit=24
-testWrite QMAG0001.dcm r
+testWrite QMAG0001.dcm r;
echo "expected pixelType=8U SamplesPerPixel=3"
echo " PlanarConfiguration=1 PhotometricInterpretation=YBR_FULL"
-affim filein=QMAG0001.dcm.raw DIMX=384 DIMY=288 nbit=24;
+affim filein=QMAG0001.dcm.RAW DIMX=384 DIMY=288 nbit=24;
-testWrite US-PAL-8-10x-echo.dcm r
+testWrite US-PAL-8-10x-echo.dcm r;
echo "expected pixelType=8U SamplesPerPixel=1 PlanarConfiguration=0"
echo " PhotometricInterpretation=PALETTE COLOR"
echo " nb Frames (DIMZ): 10"
echo "expected : Parsing 10 'single fragment' Segments"
echo " Reading 10 'single fragment' Segments (ouf!)"
-affim filein=US-PAL-8-10x-echo.dcm.raw DIMX=600 DIMY=430 nbit=24
-affim filein=US-PAL-8-10x-echo.dcm.raw DIMX=600 DIMY=430 nbit=24 offset=774000
-affim filein=US-PAL-8-10x-echo.dcm.raw DIMX=600 DIMY=430 nbit=24 offset=1548000
-affim filein=US-PAL-8-10x-echo.dcm.raw DIMX=600 DIMY=430 nbit=24 offset=6966000
+affim filein=US-PAL-8-10x-echo.dcm.RAW DIMX=600 DIMY=430 nbit=24
+affim filein=US-PAL-8-10x-echo.dcm.RAW DIMX=600 DIMY=430 nbit=24 offset=774000
+affim filein=US-PAL-8-10x-echo.dcm.RAW DIMX=600 DIMY=430 nbit=24 offset=1548000
+affim filein=US-PAL-8-10x-echo.dcm.RAW DIMX=600 DIMY=430 nbit=24 offset=6966000
-testWrite 8BitsRunLengthGrayScale.dcm r
+testWrite 8BitsRunLengthGrayScale.dcm r;
echo "expected : correct Gray image"
-affim filein=8BitsRunLengthGrayScale.dcm.raw DIMX=800 DIMY=535
+affim filein=8BitsRunLengthGrayScale.dcm.RAW DIMX=800 DIMY=535
-testWrite 8BitsRunLengthColor.dcm r
+testWrite 8BitsRunLengthColor.dcm r;
echo "expected pixelType=8U SamplesPerPixel=1 PlanarConfiguration=2"
echo " PhotometricInterpretation=PALETTE COLOR"
echo "expected correct color image"
-affim filein=8BitsRunLengthColor.dcm.raw DIMX=800 DIMY=535 nbit=24
+affim filein=8BitsRunLengthColor.dcm.RAW DIMX=800 DIMY=535 nbit=24
#RLE 16 bits --> Try to find some more images
-testWrite 16BitsRunLengthGrayScale.dcm r
+testWrite 16BitsRunLengthGrayScale.dcm r;
echo "expected pixelType=16U SamplesPerPixel=1 PlanarConfiguration=0"
echo " PhotometricInterpretation=MONOCHROME2"
-affim filein=16BitsRunLengthGrayScale.dcm.raw DIMX=800 DIMY=535 nbit=16
+affim filein=16BitsRunLengthGrayScale.dcm.RAW DIMX=800 DIMY=535 nbit=16
#Were supposed to be bugged
#--------------------------
#(break xmedcon)
-testWrite 00191113.dcm r
-affim filein=00191113.dcm.raw DIMX=512 DIMY=512
-affim filein=00191113.dcm.raw DIMX=512 DIMY=512 offset=786432
+testWrite 00191113.dcm r;
+affim filein=00191113.dcm.RAW DIMX=512 DIMY=512
+affim filein=00191113.dcm.RAW DIMX=512 DIMY=512 offset=786432
-testWrite DermaColorLossLess.dcm r
-affim filein=DermaColorLossLess.dcm.raw DIMX=117 DIMY=181 nbit=24
+testWrite DermaColorLossLess.dcm r;
+affim filein=DermaColorLossLess.dcm.RAW DIMX=117 DIMY=181 nbit=24
-testWrite RadBWLossLess.dcm r
-affim filein=RadBWLossLess.dcm.raw DIMX=136 DIMY=92 nbit=16
+testWrite RadBWLossLess.dcm r;
+affim filein=RadBWLossLess.dcm.RAW DIMX=136 DIMY=92 nbit=16
#Known as BUGGED !
#----------------
#Rectangular old 24 Bits image
-testWrite gdcm-RGB-LibIDORect.acr r
-affim filein=gdcm-RGB-LibIDORect.acr.raw DIMX=400 DIMY=100 nbit=24
+testWrite gdcm-RGB-LibIDORect.acr r;
+affim filein=gdcm-RGB-LibIDORect.acr.RAW DIMX=400 DIMY=100 nbit=24
#MR GE GENESIS_SIGNA Palo Alto
-testWrite DicomSampleNastyGEImage.dcm r
+testWrite DicomSampleNastyGEImage.dcm r;
echo "WAS expected : wrong lenth (13) for 0008|103e"
-affim filein=DicomSampleNastyGEImage.dcm.raw DIMX=256 DIMY=256 nbit=16
+affim filein=DicomSampleNastyGEImage.dcm.RAW DIMX=256 DIMY=256 nbit=16
#MR Philips NTSCAN Hop. Neuro Lyon
testWrite philipsMR-lossy.ima r;
echo "WAS expected : 'Bogus Huffman table definition' on philipsMR-lossy.ima"
echo "IS expected : 'JERR_BAD_HUFF_TABLE sym 16 (>15') but the show goes on"
echo "breaks xmedcon"
-affim filein=philipsMR-lossy.ima.raw dim=512 nbit=16
+affim filein=philipsMR-lossy.ima.RAW dim=512 nbit=16
#CT Siemens Hop. Salengro Lille
testWrite gdcm-JPEG-LossLess3a.dcm r;
echo "expected : wrong sequence delimiter (b00c,0eb6) at end of pixels";
echo "xmedcon says 'error: Unexpected end of file'"
-affim filein=gdcm-JPEG-LossLess3a.dcm.raw dim=512 nbit=16
+affim filein=gdcm-JPEG-LossLess3a.dcm.RAW dim=512 nbit=16
vtkgdcmViewer gdcm-JPEG-LossLess3a.dcm
#CR Philips Thoravision Hop Cardio Lyon
-testWrite gdcm-JPEG-LossLessThoravision.dcm r
+testWrite gdcm-JPEG-LossLessThoravision.dcm r;
echo "expected : 147 fragments,length : 29860 + 145*32760 + 14416"
echo "breaks xmedcom, breaks e-film"
echo "WAS expected : hashed image -with jLBJpeg-"
echo "IS expected : Seg Fault"
-affim filein=gdcm-JPEG-LossLessThoravision.dcm.raw DIMX=1876 DIMY=2076 nbit=16
+affim filein=gdcm-JPEG-LossLessThoravision.dcm.RAW DIMX=1876 DIMY=2076 nbit=16
#MR Picker ST. ANTHONY HOSPITAL
-testWrite MR.6799.1.dcm r
+testWrite MR.6799.1.dcm r;
echo "OK; DICOM Image with NO Preamble"
-affim filein=MR.6799.1.dcm.raw dim=512 nbit=16
+affim filein=MR.6799.1.dcm.RAW dim=512 nbit=16
#Segmented Palette Color LUT Data
-testWrite gdcm-US-ALOKA-16.dcm r
+testWrite gdcm-US-ALOKA-16.dcm r;
echo "expected pixelType=16U SamplesPerPixel=1 PlanarConfiguration=0"
echo " PhotometricInterpretation=PALETTE COLOR"
echo "expected : Gray image since 'Segmented xxx Palette Color LUT Data' not yet taken into account"
echo "breaks xmedcom"
echo "breaks vtkgdcmViewer (bad result : 24 bits expected; 16 found in Pixels area)"
vtkgdcmViewer gdcm-US-ALOKA-16.dcm
-affim dimx=640 dimy=480 filein=gdcm-US-ALOKA-16.dcm.raw nbit=16
+affim dimx=640 dimy=480 filein=gdcm-US-ALOKA-16.dcm.RAW nbit=16
# bugged Siemens 'Leonardo' image
-testWrite 8078283Leonardo.dcm r
-affim filein=8078283Leonardo.dcm.raw dim=512 nbit=16
+testWrite 8078283Leonardo.dcm r;
+affim filein=8078283Leonardo.dcm.RAW dim=512 nbit=16
#CT McTwin Elscint C.H.R.U LILLE C.HURIEZ
-testWrite MxTwinLossLess.dcm r
-affim filein=MxTwinLossLess.dcm.raw DIMX=512 DIMY=512 nbit=16
+testWrite MxTwinLossLess.dcm r;
+affim filein=MxTwinLossLess.dcm.RAW DIMX=512 DIMY=512 nbit=16
# MRI image from VPRO burned CD
-testWrite mriThruVPRO.dcm r
-affim filein=mriThruVPRO.dcm.raw DIMX=256 DIMY=256 nbit=16
+testWrite mriThruVPRO.dcm r;
+affim filein=mriThruVPRO.dcm.RAW DIMX=256 DIMY=256 nbit=16
echo "expected : tasteless SHIT !"
echo "breaks Siemens Leonardo viewer . JPEG encoding is bugged?"
# gdcm made Theralys image
# due to H table, a SeQuence is tagged with 0 length
# when using gdcmFile::WriteDcmXXX
-testWrite fromTheralys.dcm r
-affim filein=fromTheralys.dcm.raw dim=256 nbit=16
+testWrite fromTheralys.dcm r;
+affim filein=fromTheralys.dcm.RAW dim=256 nbit=16
--- /dev/null
+# Horror Picture Show
+# -------------------
+
+gdcm-MR-PHILIPS-16-Multi-Seq.dcm # 400 SQ, embedded SQ , O length sequ
+
+gdcm-MR-PHILIPS-16-NonRectPix.dcm # 22 SQ, embedded SQ , O length sequ
+
+mriThruVPRO.dcm # 7 SQ O length sequ
+
+MxTwinLossLess.dcm # 0088|0200 x(59c) [Icon Image Sequence] O length sequ
+
+icone.dcm # 0008|2112 x(264) [Source Image Sequence]
+ # 0088|0200 x(362a) [Icon Image Sequence]
+
+
+# Peacefull images
+# ----------------
+
+canadaAloka.dcm # 0018|6011 x(2f6) [Sequence of Ultrasound Regions ]
+
+CLIP0001-Sequoia-U11.dcm # 0018|6011 [Sequence of Ultrasound Regions ]
+
+cr172241.dcm # 0028|3000 x(344) [Modality LUT Sequence]
+
+fromTheralys.dcm # 0008|1140 x(2f1) [Referenced Image Sequence]
+
+gdcm-CR-DCMTK-16-NonSamplePerPix.dcm # 0008|1140 x(39a) [Referenced Image Sequence]
+ # 0008|2112 x(440) [Source Image Sequence]
+gdcm-JPEG-Extended.dcm # idem
+
+gdcm-JPEG-LossLess3a.dcm # 0008|2112 x(378) [Source Image Sequence]
+
+gdcm-MR-PHILIPS-16.dcm # 0008|1140 x(33c) [Referenced Image Sequence]
+
+I9000001.dcm # 0028|6100 x(c0e) [Mask Subtraction Sequence]
+ # 0050|0010 x(c74) [Device Sequence]
+
+multiframe2GE.dcm # 0028|6100 x(3e) [Mask Subtraction Sequence]
+ # 0050|0010 x(3c) [Device Sequence]
+
+irmPhlipsNew1.dcm # 0008|1140 x(33c) [Referenced Image Sequence]
+
+multiframe1Integris.dcm # 0028|3000 x(66c) [Modality LUT Sequence]
+
+QMAG0001.dcm # 0008|2112 x(2ac) [Source Image Sequence]
+ # 0018|6011 x(3b6) [Sequence of Ultrasound Regions ]
+
+US.1.2.dcm # 0018|6011 x(4b8) [Sequence of Ultrasound Regions ]
+
+sonataMonaco.dcm # 0008|1140 x(35a) [Referenced Image Sequence]
+
+xa_integris.dcm # 0008|1111 x(32c) [Referenced Performed Procedure Step Sequence]
+ # 0029|fd00 x(674) [unkn]
+
+
+
+
+
+++ /dev/null
-# Check READ
-#-----------
-#
-# We just write XDCM Files and AFFIM them
-# to be sure the writting was OK
-#
-# Sebastien Barre's files have no interest here, since the header is
-# a *very clean* ACR-NEMA
-# Our pb come from DICOM V3, with SQ, shadow groups, etc.
-
-
-#No Swap Info
-#------------
-testWrite mr176621.dcm x;
-#gdcmParser::CheckSwap: ACR/NEMA unfound swap info (time to raise bets)
-PrintHeader mr176621.dcm.XDCM 2 #breaks Tag with uneven length 1463107 in x(8,8) .
-v mr176621.dcm.XDCM #breaks : white image
-xmedcon mr176621.dcm.XDCM #breaks
-
-# No Transfert Syntax
-#--------------------
-#Big Endian
-
-testWrite cr172241.dcm x;
-PrintHeader cr172241.dcm; #OK
-v cr172241.dcm; # breaks
-xmedcon cr172241.dcm; # OK
-PrintHeader cr172241.dcm.XDCM 2 #down apres 0028|3006 [US][LUT Data (CTX dependent)]
-v cr172241.dcm.XDCM # NOT CHECKED
-xmedcon cr172241.dcm.XDCM # NOT CHECKED
-
-testWrite cr_45031.dcm x;
-v cr_45031.dcm.XDCM #OK
-xmedcon cr_45031.dcm.XDCM #OK
-
-testWrite CR-MONO1-10-chest.dcm x;
-PrintHeader CR-MONO1-10-chest.dcm.XDCM 2 #OK
-xmedcon CR-MONO1-10-chest.dcm.XDCM; #OK
-
-testWrite CT-MONO2-12-lomb-an2.acr2 x;
-xmedcon CT-MONO2-12-lomb-an2.acr2.XDCM; #OK
-PrintHeader CT-MONO2-12-lomb-an2.acr2.XDCM 2 # OK
-
-testWrite gdcm-MR-SIEMENS-16.acr1 x;
-PrintHeader gdcm-MR-SIEMENS-16.acr1.XDCM 2 ;
-#down0009|0000 l:x(46e55) 290389 Of:x(180)384
-v gdcm-MR-SIEMENS-16.acr1.XDCM; #black image
-xmedcon gdcm-MR-SIEMENS-16.acr1.XDCM; #breaks
-
-testWrite gdcm-MR-SIEMENS-16.acr2 x;
-PrintHeader gdcm-MR-SIEMENS-16.acr2.XDCM 2;
-v gdcm-MR-SIEMENS-16.acr2.XDCM; #OK
-xmedcon gdcm-MR-SIEMENS-16.acr2.XDCM; #breaks
-
-testWrite MR-MONO2-12-an2.acr2 x;
-PrintHeader newACR1000.nema.XDCM 2 #down
-# 0009|0000 lg :x(46e55) 290389 Off.: x(28a) 650 [Unknown]
-xmedcon MR-MONO2-12-an2.acr2.XDCM # NOT CHECKED
-
-testWrite newACR1000.nema x; # == gdcmMR-SIEMENS-16.acr2
-PrintHeader newACR1000.nema.XDCM; #OK
-v newACR1000.nema.XDCM; #OK
-xmedcon newACR1000.nema.XDCM ; # breaks : no image found
-
-testWrite oldACR00001.ima x; # == gdcm-MR-SIEMENS.16.acr1
-PrintHeader oldACR00001.ima.XDCM # OK
-v oldACR00001.ima.XDCM; #OK
-xmedcon oldACR00001.ima.XDCM # # breaks : no image found
-
-testWrite OT-MONO2-8-a7.dcm x;
-xmedcon OT-MONO2-8-a7.dcm.XDCM 2 #ok
-
-#No Samples Per Pixel
-#--------------------
-testWrite gdcm-CR-DCMTK-16-NonSamplePerPix.dcm x;
-affim filein=gdcm-CR-DCMTK-16-NonSamplePerPix.dcm dim=750 nbit=8
-PrintHeader gdcm-CR-DCMTK-16-NonSamplePerPix.dcm.XDCM 2 # OK
-
-#Unnormalized Rectangular LibIDO format image
-#--------------------------------------------
-testWrite gdcm-ACR-LibIDO.acr x;
-affim filein=gdcm-ACR-LibIDO.acr.XDCM dimx=512 dimy=301
-
-#Bits Allocated =12, Bits Stored=12
-#----------------------------------
-#MR Philips (once upon a time in Lyon-Sud)
-testWrite MR-MONO2-12-angio-an1.acr1 x;
-v MR-MONO2-12-angio-an1.acr1.XDCM # shitty image
-xmedcon R-MONO2-12-angio-an1.acr1.XDCM #pas mieux : warning: Incorrect PixelData length
-
-#RGB
-#---
-testWrite US.3405.1.dcm x;
-echo "expected pixelType=8U SamplesPerPixel=1 PlanarConfiguration=0"
-echo " PhotometricInterpretation=RGB"
-xmedcon US.3405.1.dcm.XDCM #OK
-
-testWrite OT-PAL-8-face.dcm x;
-echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=1"
-echo " PhotometricInterpretation=PALETTE COLOR"
-xmedcon OT-PAL-8-face.dcm.XDCM; #OK
-
-testWrite 8BitsUncompressedColor.dcm x;
-xmedcon 8BitsUncompressedColor.dcm.XDCM ; #OK
-
-# Implicit VR - Little Endian
-#-----------------------------
-
-testWrite CT-MONO2-16-ankle.dcm x;
- xmedcon CT-MONO2-16-ankle.dcm.XDCM; #ok
- PrintHeader CT-MONO2-16-ankle.dcm 2 #ok
-
-testWrite CT-MONO2-16-ort.dcm x;
-xmedcon CT-MONO2-16-ort.dcm.XDCM #OK
-PrintHeader CT-MONO2-16-ort.dcm.XDCM 2 #ok
-
-testWrite CT-MONO2-8-abdo.dcm x;
-xmedcon CT-MONO2-8-abdo.dcm.XDCM #OK
-
-testWrite gdcm-MR-PHILIPS-16.dcm x;
-affim filein=gdcm-MR-PHILIPS-16.dcm.XDCM
-#PrintHeader OK; v OK; breaks xmedcom
-
-testWrite MR-MONO2-16-head.dcm x;
-affim filein=MR-MONO2-16-head.dcm.XDCM
-
-testWrite multiframe1Integris.dcm x;
-affim filein=multiframe1Integris.dcm.XDCM dim=1024 nbit=16 zoom=-2
-affim filein=multiframe1Integris.dcm.XDCM dim=1024 nbit=16 offset=31457280 zoom=-2
- PrintHeader CT-MONO2-8-abdo.dcm.XDCM 2
-
-testWrite multiframe2GE.dcm x;
-v multiframe2GE.dcm.XDCM
-#breaks xmedcon
-xmedcon multiframe2GE.dcm.XDCM
-
-testWrite irmPhlipsNew1.dcm x; # == gdcm-MR-PHILIPS-16.dcm
-v irmPhlipsNew1.dcm.XDCM;
-xmedcon irmPhlipsNew1.dcm.XDCM #breaks
-
-#avec imagette (icone)
-
-testWrite icone.dcm x;
-PrintHeader icone.dcm.XDCM 2;
-#PrintHeader OK; v OK; breaks xmedcom
-v icone.dcm.XDCM
-xmedcon icone.dcm.XDCM #breaks
-
-#Palette
-
-# ???
-# 8 Bits ?
-# 16 Bits ?
-
-#Explicit VR - Little Endian
-#----------------------------
-testWrite CT-MONO2-16-brain.dcm x;
-xmedcon CT-MONO2-16-brain.dcm.XDCM #OK
-
-testWrite gdcm-MR-PHILIPS-16-Multi-Seq.dcm x;
-PrintHeader gdcm-MR-PHILIPS-16-Multi-Seq.dcm 2
-v gdcm-MR-PHILIPS-16-Multi-Seq.dcm.XDCM #expected : image de *chiottes*
-xmedcon gdcm-MR-PHILIPS-16-Multi-Seq.dcm.XDCM #breaks
-
-testWrite gdcm-MR-PHILIPS-16-NonRectPix.dcm x;
-v gdcm-MR-PHILIPS-16-NonRectPix.dcm.XDCM #OK
-xmedcon gdcm-MR-PHILIPS-16-NonRectPix.dcm.XDCM #OK
-
-testWrite MR-MONO2-8-16x-heart.dcm x; #multiframe
-v MR-MONO2-8-16x-heart.dcm.XDCM ; #OK
-xmedcon MR-MONO2-8-16x-heart.dcm.XDCM #OK
-
-testWrite NM-MONO2-16-13x-heart.dcm x; #multiframe
-xmedcon NM-MONO2-16-13x-heart.dcm.XDCM #OK
-
-testWrite sonataMonaco.dcm x;
-xmedcon sonataMonaco.dcm.XDCM #OK
-
-#MultiFrame
-testWrite US-MONO2-8-8x-execho.dcm x;
-PrintHeader US-MONO2-8-8x-execho.dcm.XDCM
-xmedcon US-MONO2-8-8x-execho.dcm.XDCM; #OK
-
-#RGB
-
-testWrite US-RGB-8-epicard.dcm x;
-echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=1"
-echo " PhotometricInterpretation=RGB"
- xmedcon US-RGB-8-epicard.dcm.XDCM #OK
-
-testWrite US-RGB-8-esopecho.dcm x;
-echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=0"
-echo " PhotometricInterpretation=RGB"
-xmedcon US-RGB-8-esopecho.dcm.XDCM #OK
-
-# Non-Hierarchical, First-Order Prediction (Process 14 [Selection Value 1])
-#--------------------------------------------------------------------------
-# (JPEG Lossless)
-
-testWrite CT-MONO2-16-chest.dcm x;
-xmedcon CT-MONO2-16-chest.dcm.XDCM #OK
-
-testWrite 012345.002.050.dcm x;
-xmedcon 012345.002.050.dcm.XDCM #OK
-
-testWrite gdcm-JPEG-LossLess3a.dcm x;
-PrintHeader gdcm-JPEG-LossLess3a.dcm.XDCM 2
-xmedcon gdcm-JPEG-LossLess3a.dcm.XDCM #OK
-
-testWrite XA-MONO2-8-12x-catheter.dcm x;
-PrintHeader XA-MONO2-8-12x-catheter.dcm.XDCM 2;
-xmedcon XA-MONO2-8-12x-catheter.dcm.XDCM; #OK
-
-testWrite xa_integris.dcm x;
-echo "a lot of fragments expected here"
-xmedcon xa_integris.dcm.XDCM #OK
-
-testWrite 16BitsJpegLosslessGrayScale.dcm x;
-xmedcon 16BitsJpegLosslessGrayScale.dcm.XDCM #OK
-
-#comming from GE dlx via VTServer
-v I9000001.dcm;
-testWrite I9000001.dcm x;
-PrintHeader I9000001.dcm.XDCM 2;
-#black image
-v I9000001.dcm.XDCM;
-#no image found
-xmedcon I9000001.dcm.XDCM;
-
-#JPEG Extended (Process 2 & 4) // 16 bits
-#-----------------------------
-testWrite gdcm-JPEG-Extended.dcm x;
-xmedcon gdcm-JPEG-Extended.dcm.XDCM #OK
-
-testWrite jpeglossy1.dcm x;
-xmedcon jpeglossy1.dcm.XDCM #OK
-
-#JPEG Baseline (Process 14)
-#--------------------------
-testWrite MR-MONO2-12-shoulder.dcm x;
-xmedcon MR-MONO2-12-shoulder.dcm.XDCM; #OK
-
-
-#fichier format ecat.
-#testWrite imageEcat.ecat r
-
-#JPEG Lossy 8 bits
-#=================
-#JPEG Baseline (Process 1)
-#-------------------------
-# Bracco Files
-testWrite US.1.2.dcm x;
-echo "expected : A lot of Fragments (40), nb Frames = 40 ;-)"
-echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=0"
-echo " PhotometricInterpretation=YBR_FULL_422"
-xmedcon US.1.2.dcm.XDCM #OK
-
-#Sequoia Acusson U11
-testWrite CLIP0001-Sequoia-U11.dcm x;
-xmedcon CLIP0001-Sequoia-U11.dcm.XDCM #OK
-
-#RLE Lossless
-#-------------
-testWrite canadaAloka.dcm x;
-echo "expected pixelType=8U SamplesPerPixel=1"
-echo " PlanarConfiguration=0 PhotometricInterpretation=MONOCHROME2"
-echo " nb Frames (DIMZ) : 1"
-xmedcon canadaAloka.dcm.XDCM
-
-testWrite jpeglossy1.dcm x;
- xmecon jpeglossy1.dcm.XDCM #OK
-
-testWrite FMAG0001.dcm x;
-echo "expected pixelType=8U SamplesPerPixel=3"
-echo " PlanarConfiguration=1 PhotometricInterpretation=YBR_FULL"
-echo " nb Frames (DIMZ) : 1"
-xmedcon FMAG0001.dcm.XDCM #OK
-
-v QMAG0001.dcm; #OK
-xmedcon QMAG0001.dcm; #original breaks xmedcon
-testWrite QMAG0001.dcm x;
-echo "expected pixelType=8U SamplesPerPixel=3";
-echo " PlanarConfiguration=1 PhotometricInterpretation=YBR_FULL";
-v QMAG0001.dcm.XDCM; #OK
-xmedcon QMAG0001.dcm.XDCM; #OK
-
-testWrite US-PAL-8-10x-echo.dcm x;
-echo "expected pixelType=8U SamplesPerPixel=1 PlanarConfiguration=0"
-echo " PhotometricInterpretation=PALETTE COLOR"
-echo " nb Frames (DIMZ): 10"
-echo "expected : Parsing 10 'single fragment' Segments"
-echo " Reading 10 'single fragment' Segments (ouf!)"
-xmedcon US-PAL-8-10x-echo.dcm.XDCM #OK
-
-testWrite 8BitsRunLengthGrayScale.dcm x;
-echo "expected : correct Gray image"
-xmedcon 8BitsRunLengthGrayScale.dcm.XDCM #OK
-
-testWrite 8BitsRunLengthColor.dcm x;
-echo "expected pixelType=8U SamplesPerPixel=1 PlanarConfiguration=2"
-echo " PhotometricInterpretation=PALETTE COLOR"
-echo "expected correct color image"
-xmedcon 8BitsRunLengthColor.dcm.XDCM #OK
-
-#RLE 16 bits --> Try to find some more images
-
-testWrite 16BitsRunLengthGrayScale.dcm x;
-echo "expected pixelType=16U SamplesPerPixel=1 PlanarConfiguration=0"
-echo " PhotometricInterpretation=MONOCHROME2"
-xmedcon 16BitsRunLengthGrayScale.dcm.XDCM #OK
-
-#Were supposed to be bugged
-#--------------------------
-#(break xmedcon)
- xmedcon 00191113.dcm #No images found
-testWrite 00191113.dcm x;
-xmedcon 00191113.dcm.XDCM #OK
-
-xmedcon DermaColorLossLess.dcm; #breaks xmedcon : No images found
-testWrite DermaColorLossLess.dcm x;
-xmedcon DermaColorLossLess.dcm.XDCM; #breaks xmedcon
-#Feb 02 19:33:16 log[2619]: warning: Tag with uneven length
-#Feb 02 19:33:16 log[2619]: warning: No transfer syntax found
-#Feb 02 19:33:16 log[2619]: error: No images found
-v DermaColorLossLess.dcm.XDCM #OK
-
-#Original breaks xmedcon, breaks v, affimdcm complian ?!
-affimdcm filein=RadBWLossLess.dcm; #OK
-v RadBWLossLess.dcm;
-xmedcon RadBWLossLess.dcm;
-testWrite RadBWLossLess.dcm x;
-#No pixel found
-v RadBWLossLess.dcm.XDCM; #No pixel found
-xmedcon RadBWLossLess.dcm.XDCM;
-
-#Known as BUGGED !
-#----------------
-
-#Rectangular old 24 Bits image
-testWrite gdcm-RGB-LibIDORect.acr x;
-v gdcm-RGB-LibIDORect.acr.XDCM
-xmedcon gdcm-RGB-LibIDORect.acr.XDCM #breaks : large Bit Allocated (24)
-
-#MR GE GENESIS_SIGNA Palo Alto
-testWrite DicomSampleNastyGEImage.dcm x;
-echo " expected : warning uneven length (13) for 0008|103e"
-xmedcon DicomSampleNastyGEImage.dcm.XDCM #OK
-
-#MR Philips NTSCAN Hop. Neuro Lyon
-PrintHeader philipsMR-lossy.ima #breaks PrintHeader ?!?
-testWrite philipsMR-lossy.ima x; #NOT CHECKED
-echo "WAS expected : 'Bogus Huffman table definition' on philipsMR-lossy.ima"
-echo "IS expected : 'JERR_BAD_HUFF_TABLE sym 16 (>15') but the show goes on"
-echo "breaks xmedcon"
-v philipsMR-lossy.ima.XDCM; #NOT CHECKED
-xmedcon philipsMR-lossy.ima.XDCM; #NOT CHECKED
-
-#CT Siemens Hop. Salengro Lille
-testWrite gdcm-JPEG-LossLess3a.dcm x;
-echo "expected : wrong sequence delimiter (b00c,0eb6) at end of pixels";
-echo "xmedcon says 'error: Unexpected end of file'"
-vtkgdcmViewer gdcm-JPEG-LossLess3a.dcm.XDCM #OK; needs 'R' for display
-xmedcon gdcm-JPEG-LossLess3a.dcm.XDCM; #OK
-
-#CR Philips Thoravision Hop Cardio Lyon
-affimdcm filein=gdcm-JPEG-LossLessThoravision.dcm #OK
-testWrite gdcm-JPEG-LossLessThoravision.dcm x;
-echo "expected : 147 fragments,length : 29860 + 145*32760 + 14416"
-echo "breaks xmedcom, breaks e-film"
-echo "WAS expected : hashed image -with jLBJpeg-"
-echo "IS expected : Seg Fault"
-xmedcon gdcm-JPEG-LossLessThoravision.dcm.XDCM # NOT CHECKED
-
-#MR Picker ST. ANTHONY HOSPITAL
-testWrite MR.6799.1.dcm x;
-echo "OK; DICOM Image with NO Preamble"
-xmedcon MR.6799.1.dcm.XDCM #OK
-
-#Segmented Palette Color LUT Data
-xmedcon gdcm-US-ALOKA-16.dcm; #breaks
-vtkgdcmViewer gdcm-US-ALOKA-16.dcm3OK
-testWrite gdcm-US-ALOKA-16.dcm x;
-echo "expected pixelType=16U SamplesPerPixel=1 PlanarConfiguration=0"
-echo " PhotometricInterpretation=PALETTE COLOR"
-echo "expected : Gray image since 'Segmented xxx Palette Color LUT Data' not yet taken into account"
-echo "neither e-film nor DicomWorks deals with the color"
-echo "breaks xmedcom"
-echo "breaks vtkgdcmViewer (bad result : 24 bits expected; 16 found in Pixels area)"
-vtkgdcmViewer gdcm-US-ALOKA-16.dcm.XDCM #OK
-xmedcon gdcm-US-ALOKA-16.dcm.XDCM #breaks
-#Feb 03 13:40:19 log[26999]: error: Missing CLUT
-#Feb 03 13:40:19 log[26999]: error: No images found
-
-# bugged Siemens 'Leonardo' image
-testWrite 8078283Leonardo.dcm x;
-xmedcon 8078283Leonardo.dcm.XDCM #OK
-
-#CT McTwin Elscint C.H.R.U LILLE C.HURIEZ
- xmedcon MxTwinLossLess.dcm #breaks
- v MxTwinLossLess.dcm #OK
- testWrite MxTwinLossLess.dcm x;
- v MxTwinLossLess.dcm.XDCM; #OK
- xmedcon MxTwinLossLess.dcm.XDCM #breaks
-
-# MRI image from VPRO burned CD
-v mriThruVPRO.dcm; # Tasteless SHIT
-xmedcon mriThruVPRO.dcm; # pas mieux
-testWrite mriThruVPRO.dcm x;
-v mriThruVPRO.dcm.XDCM
-echo "expected : tasteless SHIT !"
-echo "breaks Siemens Leonardo viewer . JPEG encoding is bugged?"
-
-# gdcm made Theralys image
-# due to H table, a SeQuence is tagged with 0 length
-# when using gdcmFile::WriteDcmXXX
-xmedcon fromTheralys.dcm # Original breaks xmedcon
-testWrite fromTheralys.dcm x;
-v fromTheralys.dcm.XDCM; # OK (unsolved Length = 13 ...)
-xmedcon fromTheralys.dcm.XDCM # Breaks : no image found
#------------
testWrite mr176621.dcm x;
PrintHeader mr176621.dcm.XDCM 2; .
-v mr176621.dcm.XDCM; # white image
+v mr176621.dcm.XDCM; # OK
xmedcon mr176621.dcm.XDCM; #breaks because 'DICM" without group 0000
# Write DCM needs 'CheckFileHeaderConsistency' method
#--------------------
#Big Endian
-affimdcm filein=cr172241.dcm.XDCM zoom=-4;
+
+# ------------------------------------------- BIG SOUCY !!
+affimdcm filein=cr172241.dcm zoom=-4;
xmedcon cr172241.dcm; # OK
testWrite cr172241.dcm r;
v cr172241.dcm; # breaks (white image) WHITE IMAGE ?!?
# Doesn't break DaVaW ...
testWrite cr172241.dcm x;
-PrintHeader cr172241.dcm.XDCM 2; #OK
-xmedcon cr172241.dcm.XDCM; # OK
-v cr172241.dcm.XDCM; # breaks ?!? White image !
+PrintHeader cr172241.dcm.XDCM 2; #OK
+xmedcon cr172241.dcm.XDCM; # OK Incorrect OB value representation (fixed)
+affimdcm filein=cr172241.dcm.XDCM; # OK
+v cr172241.dcm.XDCM; # breaks ?!? White image !
testWrite cr_45031.dcm x;
-v cr_45031.dcm.XDCM; #OK
+v cr_45031.dcm.XDCM; #OK
xmedcon cr_45031.dcm.XDCM; #OK
testWrite CR-MONO1-10-chest.dcm x;
PrintHeader CR-MONO1-10-chest.dcm.XDCM 2; #OK
-v CR-MONO1-10-chest.dcm.XDCM;
-xmedcon CR-MONO1-10-chest.dcm.XDCM; #OK
+v CR-MONO1-10-chest.dcm.XDCM; #OK
+xmedcon CR-MONO1-10-chest.dcm.XDCM; #OK Incorrect OB value representation (fixed)
testWrite CT-MONO2-12-lomb-an2.acr2 x;
PrintHeader CT-MONO2-12-lomb-an2.acr2.XDCM 2; # OK
v CT-MONO2-12-lomb-an2.acr2.XDCM; #OK
-xmedcon CT-MONO2-12-lomb-an2.acr2.XDCM; #OK
+xmedcon CT-MONO2-12-lomb-an2.acr2.XDCM; #OK Incorrect OB value representation (fixed)
xmedcon gdcm-MR-SIEMENS-16.acr1; # Original OK
PrintHeader gdcm-MR-SIEMENS-16.acr1; #OK
testWrite gdcm-MR-SIEMENS-16.acr2 x;
PrintHeader gdcm-MR-SIEMENS-16.acr2.XDCM 2;
v gdcm-MR-SIEMENS-16.acr2.XDCM; #OK
-xmedcon gdcm-MR-SIEMENS-16.acr2.XDCM; #breaks
+xmedcon gdcm-MR-SIEMENS-16.acr2.XDCM; #breaks
+ # --> TODO fix group length for odd groups
#Feb 03 18:50:24 log[4419]: warning: No transfer syntax found
#Feb 03 18:50:24 log[4419]: warning: Tag with uneven length
#Feb 03 18:50:24 log[4419]: error: No images found
testWrite gdcm-CR-DCMTK-16-NonSamplePerPix.dcm x;
affim filein=gdcm-CR-DCMTK-16-NonSamplePerPix.dcm;
PrintHeader gdcm-CR-DCMTK-16-NonSamplePerPix.dcm.XDCM 2; # OK
-v gdcm-CR-DCMTK-16-NonSamplePerPix.dcm.XDCM; #OK
-xmedcon gdcm-CR-DCMTK-16-NonSamplePerPix.dcm.XDCM #OK
+v gdcm-CR-DCMTK-16-NonSamplePerPix.dcm.XDCM; #OK
+xmedcon gdcm-CR-DCMTK-16-NonSamplePerPix.dcm.XDCM #OK
#Unnormalized Rectangular LibIDO format image
#--------------------------------------------
v US.3405.1.dcm.XDCM; #OK
xmedcon US.3405.1.dcm.XDCM; #OK
+# ------------------------------------------- KING SIZE SOUCY !!
+
testWrite OT-PAL-8-face.dcm x;
echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=1";
echo " PhotometricInterpretation=PALETTE COLOR";
PrintHeaderOT-PAL-8-face.dcm.XDCM; OK
+affimdcm filein=OT-PAL-8-face.dcm.XDCM; #OK
v OT-PAL-8-face.dcm.XDCM; # seg fault .!?
xmedcon OT-PAL-8-face.dcm.XDCM; #OK
testWrite icone.dcm x;
PrintHeader icone.dcm.XDCM 2;
#PrintHeader OK; v OK; breaks xmedcom
-v icone.dcm.XDCM; # shitty image
+v icone.dcm.XDCM; # shitty image --> TODO : FIX (once again)icon pb
xmedcon icone.dcm.XDCM; #breaks
#Palette
#Explicit VR - Little Endian
#----------------------------
testWrite CT-MONO2-16-brain.dcm x;
-v CT-MONO2-16-brain.dcm.XDCM; #OK
+v CT-MONO2-16-brain.dcm.XDCM; #OK
xmedcon CT-MONO2-16-brain.dcm.XDCM; #OK
PrintHeader gdcm-MR-PHILIPS-16-Multi-Seq.dcm 2;
testWrite gdcm-MR-PHILIPS-16-Multi-Seq.dcm x;
PrintHeader gdcm-MR-PHILIPS-16-Multi-Seq.dcm.XDCM 2; #pixel group missing??!?
#v gdcm-MR-PHILIPS-16-Multi-Seq.dcm.XDCM; #shitty image, ofcourse
-xmedcon gdcm-MR-PHILIPS-16-Multi-Seq.dcm.XDCM; # works ?!?
+xmedcon gdcm-MR-PHILIPS-16-Multi-Seq.dcm.XDCM; # works ?!?
+v gdcm-MR-PHILIPS-16-Multi-Seq.dcm.XDCM;
+
testWrite gdcm-MR-PHILIPS-16-NonRectPix.dcm x;
v gdcm-MR-PHILIPS-16-NonRectPix.dcm.XDCM; #OK
xmedcon gdcm-MR-PHILIPS-16-NonRectPix.dcm.XDCM; #OK warning: Incorrect sequence length
-testWrite MR-MONO2-8-16x-heart.dcm x; #multiframe # equals to ???
-v MR-MONO2-8-16x-heart.dcm.XDCM; #OK
+testWrite MR-MONO2-8-16x-heart.dcm x; #multiframe # equals to ???
+v MR-MONO2-8-16x-heart.dcm.XDCM; #OK
xmedcon MR-MONO2-8-16x-heart.dcm.XDCM; #OK
testWrite NM-MONO2-16-13x-heart.dcm x; #multiframe
-v NM-MONO2-16-13x-heart.dcm.XDCM; #OK
+v NM-MONO2-16-13x-heart.dcm.XDCM; #OK
xmedcon NM-MONO2-16-13x-heart.dcm.XDCM; #OK
testWrite sonataMonaco.dcm x;
-v sonataMonaco.dcm.XDCM; #OK
+v sonataMonaco.dcm.XDCM; #OK
xmedcon sonataMonaco.dcm.XDCM; #OK
#MultiFrame
testWrite US-MONO2-8-8x-execho.dcm x;
PrintHeader US-MONO2-8-8x-execho.dcm.XDCM;
-v US-MONO2-8-8x-execho.dcm.XDCM; # OK
+v US-MONO2-8-8x-execho.dcm.XDCM; # OK
xmedcon US-MONO2-8-8x-execho.dcm.XDCM; #OK
#RGB
--- /dev/null
+# Check READ
+#-----------
+#
+# We just write DCM Files and AFFIM them
+# to be sure the writting was OK
+#
+# Sebastien Barre's files have no interest here, since the header is
+# a *very clean* ACR-NEMA
+# Our pb come from DICOM V3, with SQ, shadow groups, etc.
+
+
+#No Swap Info
+#------------
+testWrite mr176621.dcm d;
+#gdcmParser::CheckSwap: ACR/NEMA unfound swap info (time to raise bets)
+PrintHeader mr176621.dcm.DCM 2; .
+v mr176621.dcm.DCM; #OK
+xmedcon mr176621.dcm.DCM; #OK
+
+# No Transfert Syntax
+#--------------------
+
+#Big Endian
+testWrite cr172241.dcm r; # Big Soucy !!
+affim filein=cr172241.dcm.RAW nbit=16 DIMX=1792 DIMY=2392; #OK
+PrintHeader cr172241.dcm 2; #OK
+v cr172241.dcm; # breaks (white image) WHITE IMAGE ?!?
+xmedcon cr172241.dcm; # OK
+#--
+testWrite cr172241.dcm d;
+PrintHeader cr172241.dcm.DCM 2; #OK
+v cr172241.dcm.DCM; # breaks ?!?
+xmedcon cr172241.dcm.DCM; # OK
+
+testWrite cr_45031.dcm d;
+v cr_45031.dcm.DCM; #OK
+xmedcon cr_45031.dcm.DCM; #OK
+
+testWrite CR-MONO1-10-chest.dcm d;
+PrintHeader CR-MONO1-10-chest.dcm.DCM 2; #OK
+xmedcon CR-MONO1-10-chest.dcm.DCM; #OK
+
+testWrite CT-MONO2-12-lomb-an2.acr2 d;
+PrintHeader CT-MONO2-12-lomb-an2.acr2.DCM 2; # OK
+v CT-MONO2-12-lomb-an2.acr2.DCM; #OK
+xmedcon CT-MONO2-12-lomb-an2.acr2.DCM; #OK
+
+PrintHeader gdcm-MR-SIEMENS-16.acr1; #OK
+testWrite gdcm-MR-SIEMENS-16.acr1 d;
+PrintHeader gdcm-MR-SIEMENS-16.acr1.DCM 2 ;
+v gdcm-MR-SIEMENS-16.acr1.DCM;
+xmedcon gdcm-MR-SIEMENS-16.acr1.DCM; #breaks error: No images found
+xmedcon gdcm-MR-SIEMENS-16.acr1; # OK
+
+testWrite gdcm-MR-SIEMENS-16.acr2 d;
+PrintHeader gdcm-MR-SIEMENS-16.acr2.DCM 2;
+v gdcm-MR-SIEMENS-16.acr2.DCM; #OK
+xmedcon gdcm-MR-SIEMENS-16.acr2.DCM; #breaks
+#Feb 03 18:50:24 log[4419]: warning: No transfer syntax found
+#Feb 03 18:50:24 log[4419]: warning: Tag with uneven length
+#Feb 03 18:50:24 log[4419]: error: No images found
+
+testWrite MR-MONO2-12-an2.acr2 d;
+PrintHeader newACR1000.nema.DCM 2;
+xmedcon MR-MONO2-12-an2.acr2.DCM; # NOT CHECKED
+
+testWrite newACR1000.nema d; # == gdcmMR-SIEMENS-16.acr2
+PrintHeader newACR1000.nema.DCM; #OK
+v newACR1000.nema.DCM; #OK
+xmedcon newACR1000.nema.DCM; # breaks : no image found
+
+testWrite oldACR00001.ima d; # == gdcm-MR-SIEMENS.16.acr1
+PrintHeader oldACR00001.ima.DCM; # OK
+v oldACR00001.ima.DCM; #OK
+xmedcon oldACR00001.ima.DCM; # breaks : no image found
+
+testWrite OT-MONO2-8-a7.dcm d;
+xmedcon OT-MONO2-8-a7.dcm.DCM 2; #ok
+
+#No Samples Per Pixel
+#--------------------
+testWrite gdcm-CR-DCMTK-16-NonSamplePerPix.dcm d;
+affim filein=gdcm-CR-DCMTK-16-NonSamplePerPix.dcm;
+PrintHeader gdcm-CR-DCMTK-16-NonSamplePerPix.dcm.DCM 2; # OK
+
+#Unnormalized Rectangular LibIDO format image
+#--------------------------------------------
+testWrite gdcm-ACR-LibIDO.acr d;
+v gdcm-ACR-LibIDO.acr.DCM;
+xmedcon gdcm-ACR-LibIDO.acr.DCM;
+
+#Bits Allocated =12, Bits Stored=12
+#----------------------------------
+#MR Philips (once upon a time in Lyon-Sud)
+testWrite MR-MONO2-12-angio-an1.acr1 d;
+v MR-MONO2-12-angio-an1.acr1.DCM; # shitty image
+xmedcon R-MONO2-12-angio-an1.acr1.DCM;#pas mieux : warning: Incorrect PixelData length
+
+#RGB
+#---
+testWrite US.3405.1.dcm d;
+echo "expected pixelType=8U SamplesPerPixel=1 PlanarConfiguration=0";
+echo " PhotometricInterpretation=RGB";
+xmedcon US.3405.1.dcm.DCM; #OK
+
+testWrite OT-PAL-8-face.dcm d;
+echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=1";
+echo " PhotometricInterpretation=PALETTE COLOR";
+xmedcon OT-PAL-8-face.dcm.DCM; #OK
+
+testWrite 8BitsUncompressedColor.dcm d;
+xmedcon 8BitsUncompressedColor.dcm.DCM ; #OK
+
+# Implicit VR - Little Endian
+#-----------------------------
+
+testWrite CT-MONO2-16-ankle.dcm d;
+ xmedcon CT-MONO2-16-ankle.dcm.DCM; #ok
+ PrintHeader CT-MONO2-16-ankle.dcm 2; #ok
+
+testWrite CT-MONO2-16-ort.dcm d;
+xmedcon CT-MONO2-16-ort.dcm.DCM; #OK
+PrintHeader CT-MONO2-16-ort.dcm.DCM 2; #ok
+
+testWrite CT-MONO2-8-abdo.dcm d;
+xmedcon CT-MONO2-8-abdo.dcm.DCM; #OK
+
+testWrite gdcm-MR-PHILIPS-16.dcm d;
+PrintHeader gdcm-MR-PHILIPS-16.dcm.DCM 2; #OK
+v gdcm-MR-PHILIPS-16.dcm.DCM; # OK
+xmedcom gdcm-MR-PHILIPS-16.dcm.DCM; # error: No images found
+xmedcom gdcm-MR-PHILIPS-16.dcm; # OK with original image
+
+testWrite MR-MONO2-16-head.dcm d;
+xmedcon MR-MONO2-16-head.dcm.DCM; #OK
+
+testWrite multiframe1Integris.dcm d;
+PrintHeader CT-MONO2-8-abdo.dcm.DCM 2; #OK
+v multiframe1Integris.dcm.DCM; #OK
+xmedcon multiframe1Integris.dcm.DCM; #breaks No images found
+
+testWrite multiframe2GE.dcm d;
+v multiframe2GE.dcm.DCM; #OK
+#breaks xmedcon
+xmedcon multiframe2GE.dcm.DCM; #breaks No images found
+
+v irmPhlipsNew1.dcm;
+testWrite irmPhlipsNew1.dcm d; # == gdcm-MR-PHILIPS-16.dcm
+v irmPhlipsNew1.dcm.DCM; # black image
+xmedcon irmPhlipsNew1.dcm.DCM; #breaks
+
+#avec imagette (icone)
+
+testWrite icone.dcm d;
+PrintHeader icone.dcm.DCM 2;
+#PrintHeader OK; v OK; breaks xmedcom
+v icone.dcm.DCM;
+xmedcon icone.dcm.DCM; #breaks
+
+#Palette
+
+# ???
+# 8 Bits ?
+# 16 Bits ?
+
+#Explicit VR - Little Endian
+#----------------------------
+testWrite CT-MONO2-16-brain.dcm d;
+xmedcon CT-MONO2-16-brain.dcm.DCM; #OK
+
+PrintHeader gdcm-MR-PHILIPS-16-Multi-Seq.dcm 2;
+xmedcon gdcm-MR-PHILIPS-16-Multi-Seq.dcm #OK :Skip PHILIPS premature item bug
+v gdcm-MR-PHILIPS-16-Multi-Seq.dcm; #OK
+testWrite gdcm-MR-PHILIPS-16-Multi-Seq.dcm d;
+PrintHeader gdcm-MR-PHILIPS-16-Multi-Seq.dcm.DCM 2; #pixel group missing ?!?
+v gdcm-MR-PHILIPS-16-Multi-Seq.dcm.DCM; #NOT CHECKED
+xmedcon gdcm-MR-PHILIPS-16-Multi-Seq.dcm.DCM; #breaks
+
+testWrite gdcm-MR-PHILIPS-16-NonRectPix.dcm d;
+v gdcm-MR-PHILIPS-16-NonRectPix.dcm.DCM; #OK
+xmedcon gdcm-MR-PHILIPS-16-NonRectPix.dcm.DCM; #OK
+
+testWrite MR-MONO2-8-16x-heart.dcm d; #multiframe
+v MR-MONO2-8-16x-heart.dcm.DCM; #OK
+xmedcon MR-MONO2-8-16x-heart.dcm.DCM; #OK
+
+testWrite NM-MONO2-16-13x-heart.dcm d; #multiframe
+xmedcon NM-MONO2-16-13x-heart.dcm.DCM; #OK
+
+testWrite sonataMonaco.dcm d;
+xmedcon sonataMonaco.dcm.DCM; #OK
+
+#MultiFrame
+testWrite US-MONO2-8-8x-execho.dcm d;
+PrintHeader US-MONO2-8-8x-execho.dcm.DCM;
+xmedcon US-MONO2-8-8x-execho.dcm.DCM; #OK
+
+#RGB
+
+testWrite US-RGB-8-epicard.dcm d;
+echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=1";
+echo " PhotometricInterpretation=RGB";
+ xmedcon US-RGB-8-epicard.dcm.DCM; #OK
+
+testWrite US-RGB-8-esopecho.dcm d;
+echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=0";
+echo " PhotometricInterpretation=RGB",
+xmedcon US-RGB-8-esopecho.dcm.DCM; #OK
+
+# Non-Hierarchical, First-Order Prediction (Process 14 [Selection Value 1])
+#--------------------------------------------------------------------------
+# (JPEG Lossless)
+
+testWrite CT-MONO2-16-chest.dcm d;
+xmedcon CT-MONO2-16-chest.dcm.DCM; #OK
+
+testWrite 012345.002.050.dcm d;
+xmedcon 012345.002.050.dcm.DCM; #OK
+
+testWrite gdcm-JPEG-LossLess3a.dcm d;
+PrintHeader gdcm-JPEG-LossLess3a.dcm.DCM 2;
+xmedcon gdcm-JPEG-LossLess3a.dcm.DCM; #OK
+
+testWrite XA-MONO2-8-12x-catheter.dcm d;
+PrintHeader XA-MONO2-8-12x-catheter.dcm.DCM 2;
+xmedcon XA-MONO2-8-12x-catheter.dcm.DCM; #OK
+
+testWrite xa_integris.dcm d;
+echo "a lot of fragments expected here";
+xmedcon xa_integris.dcm.DCM #OK
+
+testWrite 16BitsJpegLosslessGrayScale.dcm d;
+xmedcon 16BitsJpegLosslessGrayScale.dcm.DCM #OK
+
+#comming from GE dlx via VTServer
+v I9000001.dcm;
+testWrite I9000001.dcm d;
+PrintHeader I9000001.dcm.DCM 2;
+#black image
+v I9000001.dcm.DCM;
+#no image found
+xmedcon I9000001.dcm.DCM;
+
+#JPEG Extended (Process 2 & 4) // 16 bits
+#-----------------------------
+testWrite gdcm-JPEG-Extended.dcm d;
+xmedcon gdcm-JPEG-Extended.dcm.DCM; #OK
+
+testWrite jpeglossy1.dcm d;
+xmedcon jpeglossy1.dcm.DCM #OK
+
+#JPEG Baseline (Process 14)
+#--------------------------
+testWrite MR-MONO2-12-shoulder.dcm d;
+xmedcon MR-MONO2-12-shoulder.dcm.DCM; #OK
+
+
+#fichier format ecat.
+#testWrite imageEcat.ecat r
+
+#JPEG Lossy 8 bits
+#=================
+#JPEG Baseline (Process 1)
+#-------------------------
+# Bracco Files
+testWrite US.1.2.dcm d;
+echo "expected : A lot of Fragments (40), nb Frames = 40 ;-)";
+echo "expected pixelType=8U SamplesPerPixel=3 PlanarConfiguration=0";
+echo " PhotometricInterpretation=YBR_FULL_422";
+xmedcon US.1.2.dcm.DCM; #OK
+
+#Sequoia Acusson U11
+testWrite CLIP0001-Sequoia-U11.dcm d;
+xmedcon CLIP0001-Sequoia-U11.dcm.DCM; #OK
+
+#RLE Lossless
+#-------------
+testWrite canadaAloka.dcm d;
+echo "expected pixelType=8U SamplesPerPixel=1";
+echo " PlanarConfiguration=0 PhotometricInterpretation=MONOCHROME2";
+echo " nb Frames (DIMZ) : 1";
+xmedcon canadaAloka.dcm.DCM;
+
+testWrite jpeglossy1.dcm d;
+ xmecon jpeglossy1.dcm.DCM; #OK
+
+testWrite FMAG0001.dcm d;
+echo "expected pixelType=8U SamplesPerPixel=3";
+echo " PlanarConfiguration=1 PhotometricInterpretation=YBR_FULL";
+echo " nb Frames (DIMZ) : 1";
+xmedcon FMAG0001.dcm.DCM; #OK
+
+v QMAG0001.dcm; #OK
+xmedcon QMAG0001.dcm; #original breaks xmedcon
+testWrite QMAG0001.dcm d;
+echo "expected pixelType=8U SamplesPerPixel=3";
+echo " PlanarConfiguration=1 PhotometricInterpretation=YBR_FULL";
+v QMAG0001.dcm.DCM; #OK
+xmedcon QMAG0001.dcm.DCM; #OK
+
+testWrite US-PAL-8-10x-echo.dcm d;
+echo "expected pixelType=8U SamplesPerPixel=1 PlanarConfiguration=0";
+echo " PhotometricInterpretation=PALETTE COLOR";
+echo " nb Frames (DIMZ): 10";
+echo "expected : Parsing 10 'single fragment' Segments";
+echo " Reading 10 'single fragment' Segments (ouf!)";
+xmedcon US-PAL-8-10x-echo.dcm.DCM; #OK
+
+testWrite 8BitsRunLengthGrayScale.dcm d;
+echo "expected : correct Gray image";
+xmedcon 8BitsRunLengthGrayScale.dcm.DCM; #OK
+
+testWrite 8BitsRunLengthColor.dcm d;
+echo "expected pixelType=8U SamplesPerPixel=1 PlanarConfiguration=2";
+echo " PhotometricInterpretation=PALETTE COLOR";
+echo "expected correct color image";
+xmedcon 8BitsRunLengthColor.dcm.DCM; #OK
+
+#RLE 16 bits --> Try to find some more images
+
+testWrite 16BitsRunLengthGrayScale.dcm d;
+echo "expected pixelType=16U SamplesPerPixel=1 PlanarConfiguration=0";
+echo " PhotometricInterpretation=MONOCHROME2";
+xmedcon 16BitsRunLengthGrayScale.dcm.DCM; #OK
+
+#Were supposed to be bugged
+#--------------------------
+#(break xmedcon)
+ xmedcon 00191113.dcm; #No images found
+testWrite 00191113.dcm d;
+xmedcon 00191113.dcm.DCM; #OK
+
+xmedcon DermaColorLossLess.dcm; #breaks xmedcon : No images found
+testWrite DermaColorLossLess.dcm d;
+xmedcon DermaColorLossLess.dcm.DCM; #breaks xmedcon
+#Feb 02 19:33:16 log[2619]: warning: Tag with uneven length
+#Feb 02 19:33:16 log[2619]: warning: No transfer syntax found
+#Feb 02 19:33:16 log[2619]: error: No images found
+v DermaColorLossLess.dcm.DCM #OK
+
+#Original breaks xmedcon, affimdcm complian ?!
+affimdcm filein=RadBWLossLess.dcm; #OK
+v RadBWLossLess.dcm; #OK
+xmedcon RadBWLossLess.dcm; # breaks :error: No images found
+testWrite RadBWLossLess.dcm d;
+v RadBWLossLess.dcm.DCM; #OK
+xmedcon RadBWLossLess.dcm.DCM; #error: No images found
+
+#Known as BUGGED !
+#----------------
+
+#Rectangular old 24 Bits image
+testWrite gdcm-RGB-LibIDORect.acr d;
+v gdcm-RGB-LibIDORect.acr.DCM;
+xmedcon gdcm-RGB-LibIDORect.acr.DCM; # breaks : large Bit Allocated (24)
+#TODO transform '24 bit images' into 8 bits + samples per pixel = 3
+
+#MR GE GENESIS_SIGNA Palo Alto
+testWrite DicomSampleNastyGEImage.dcm d;
+echo " expected : warning uneven length (13) for 0008|103e";
+xmedcon DicomSampleNastyGEImage.dcm.DCM; #OK
+
+#MR Philips NTSCAN Hop. Neuro Lyon
+PrintHeader philipsMR-lossy.ima #OK
+xmedcon philipsMR-lossy.ima; #original breaks xmedcon
+v philipsMR-lossy.ima; #Original OK
+testWrite philipsMR-lossy.ima d;
+echo "WAS expected : 'Bogus Huffman table definition' on philipsMR-lossy.ima";
+echo "IS expected : 'JERR_BAD_HUFF_TABLE sym 16 (>15)' but the show goes on";
+v philipsMR-lossy.ima.DCM; #OK
+xmedcon philipsMR-lossy.ima.DCM; #OK
+
+#CT Siemens Hop. Salengro Lille
+testWrite gdcm-JPEG-LossLess3a.dcm d;
+echo "expected : wrong sequence delimiter (b00c,0eb6) at end of pixels";
+echo "xmedcon says 'error: Unexpected end of file'";
+vtkgdcmViewer gdcm-JPEG-LossLess3a.dcm.DCM; #OK; needs 'R' for display
+xmedcon gdcm-JPEG-LossLess3a.dcm.DCM; #OK
+
+#CR Philips Thoravision Hop Cardio Lyon
+affimdcm filein=gdcm-JPEG-LossLessThoravision.dcm; # OK, wrong image as usual
+xmedcon gdcm-JPEG-LossLessThoravision.dcm; #original seg faults xmedcon
+testWrite gdcm-JPEG-LossLessThoravision.dcm d; #breaks ;
+echo "expected : 147 fragments,length : 29860 + 145*32760 + 14416";
+echo "breaks xmedcom, breaks e-film";
+echo "WAS expected : hashed image -with jLBJpeg-";
+echo "IS expected : Seg Fault";
+xmedcon gdcm-JPEG-LossLessThoravision.dcm.DCM; # NOT CHECKED
+
+#MR Picker ST. ANTHONY HOSPITAL
+testWrite MR.6799.1.dcm d;
+echo "OK; DICOM Image with NO Preamble";
+xmedcon MR.6799.1.dcm.DCM; #OK
+
+#Segmented Palette Color LUT Data
+xmedcon gdcm-US-ALOKA-16.dcm; #breaks
+vtkgdcmViewer gdcm-US-ALOKA-16.dcm3; #OK
+testWrite gdcm-US-ALOKA-16.dcm d;
+echo "expected pixelType=16U SamplesPerPixel=1 PlanarConfiguration=0";
+echo " PhotometricInterpretation=PALETTE COLOR";
+echo "expected : Gray image since 'Segmented xxx Palette Color LUT Data' not yet taken into account";
+echo "neither e-film nor DicomWorks deals with the color"
+echo "breaks xmedcom";
+echo "breaks vtkgdcmViewer (bad result : 24 bits expected; 16 found in Pixels area)";
+vtkgdcmViewer gdcm-US-ALOKA-16.dcm.DCM; #OK
+xmedcon gdcm-US-ALOKA-16.dcm.DCM; #breaks
+#Feb 03 13:40:19 log[26999]: error: Missing CLUT
+#Feb 03 13:40:19 log[26999]: error: No images found
+
+# bugged Siemens 'Leonardo' image
+testWrite 8078283Leonardo.dcm d;
+xmedcon 8078283Leonardo.dcm.DCM; #OK
+
+#CT McTwin Elscint C.H.R.U LILLE C.HURIEZ
+ xmedcon MxTwinLossLess.dcm; #breaks
+ v MxTwinLossLess.dcm; #OK
+ testWrite MxTwinLossLess.dcm d;
+ v MxTwinLossLess.dcm.DCM; #OK
+ xmedcon MxTwinLossLess.dcm.DCM #breaks
+
+# MRI image from VPRO burned CD
+v mriThruVPRO.dcm; # Tasteless SHIT
+xmedcon mriThruVPRO.dcm; # pas mieux
+testWrite mriThruVPRO.dcm d;
+v mriThruVPRO.dcm.DCM;
+echo "expected : tasteless SHIT !"
+echo "breaks Siemens Leonardo viewer . JPEG encoding is bugged?"
+
+# gdcm made Theralys image
+# due to H table, a SeQuence is tagged with 0 length
+# when using gdcmFile::WriteDcmXXX
+xmedcon fromTheralys.dcm; # Original breaks xmedcon
+testWrite fromTheralys.dcm d;
+v fromTheralys.dcm.DCM; # OK (unsolved Length = 13 ...)
+xmedcon fromTheralys.dcm.DCM; # Breaks : no image found
git://git.creatis.insa-lyon.fr / gdcmData.git / commitdiff