-/*=========================================================================
- Program: vv http://www.creatis.insa-lyon.fr/rio/vv
-
- Authors belong to:
- - University of LYON http://www.universite-lyon.fr/
- - Léon Bérard cancer center http://www.centreleonberard.fr
- - CREATIS CNRS laboratory http://www.creatis.insa-lyon.fr
-
- This software is distributed WITHOUT ANY WARRANTY; without even
- the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
- PURPOSE. See the copyright notices for more information.
-
- It is distributed under dual licence
-
- - BSD See included LICENSE.txt file
- - CeCILL-B http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
-===========================================================================**/
-#ifndef clitkAndGenericFilter_txx
-#define clitkAndGenericFilter_txx
-
-/* =================================================
- * @file clitkAndGenericFilter.txx
- * @author
- * @date
- *
- * @brief
- *
- ===================================================*/
-
-
-namespace clitk
-{
-
- //-------------------------------------------------------------------
- // Update with the number of dimensions
- //-------------------------------------------------------------------
- template<unsigned int Dimension>
- void
- AndGenericFilter::UpdateWithDim(std::string PixelType)
- {
- if (m_Verbose) std::cout << "Image was detected to be "<<Dimension<<"D and "<< PixelType<<"..."<<std::endl;
-
- if(PixelType == "short"){
- if (m_Verbose) std::cout << "Launching filter in "<< Dimension <<"D and signed short..." << std::endl;
- UpdateWithDimAndPixelType<Dimension, signed short>();
- }
- // else if(PixelType == "unsigned_short"){
- // if (m_Verbose) std::cout << "Launching filter in "<< Dimension <<"D and unsigned_short..." << std::endl;
- // UpdateWithDimAndPixelType<Dimension, unsigned short>();
- // }
-
- else if (PixelType == "unsigned_char"){
- if (m_Verbose) std::cout << "Launching filter in "<< Dimension <<"D and unsigned_char..." << std::endl;
- UpdateWithDimAndPixelType<Dimension, unsigned char>();
- }
-
- // else if (PixelType == "char"){
- // if (m_Verbose) std::cout << "Launching filter in "<< Dimension <<"D and signed_char..." << std::endl;
- // UpdateWithDimAndPixelType<Dimension, signed char>();
- // }
- else {
- if (m_Verbose) std::cout << "Launching filter in "<< Dimension <<"D and float..." << std::endl;
- UpdateWithDimAndPixelType<Dimension, float>();
- }
- }
-
-
- //-------------------------------------------------------------------
- // Update with the number of dimensions and the pixeltype
- //-------------------------------------------------------------------
- template <unsigned int Dimension, class PixelType>
- void
- AndGenericFilter::UpdateWithDimAndPixelType()
- {
-
- // ImageTypes
- typedef itk::Image<PixelType, Dimension> InputImageType;
- typedef itk::Image<int, Dimension> InternalImageType;
- typedef itk::Image<PixelType, Dimension> OutputImageType;
-
- // Read the input
- typedef itk::ImageFileReader<InputImageType> InputReaderType;
- typename InputReaderType::Pointer reader = InputReaderType::New();
- reader->SetFileName( m_InputFileName);
- reader->Update();
- typename InputImageType::Pointer input= reader->GetOutput();
-
- // Read the second input
- typename InputReaderType::Pointer reader2 = InputReaderType::New();
- reader2->SetFileName( m_ArgsInfo.input2_arg);
- reader2->Update();
- typename InputImageType::Pointer input2= reader2->GetOutput();
-
-
- // Cast
- typedef itk::CastImageFilter<InputImageType, InternalImageType> InputCastImageFilterType;
- typename InputCastImageFilterType::Pointer caster= InputCastImageFilterType::New();
- caster->SetInput(input);
- typename InputCastImageFilterType::Pointer caster2= InputCastImageFilterType::New();
- caster->SetInput(input2);
-
- // Filter
- typedef itk::AndImageFilter< InternalImageType , InternalImageType , InternalImageType> AndFilterType;
- typename AndFilterType::Pointer andFilter = AndFilterType::New();
- andFilter->SetInput1(caster->GetOutput());
- andFilter->SetInput2(caster2->GetOutput());
- if (m_Verbose) std::cout<<"Performing a logical AND..."<<std::endl;
-
- // Cast
- typedef itk::CastImageFilter<InternalImageType, OutputImageType> OutputCastImageFilterType;
- typename OutputCastImageFilterType::Pointer caster3= OutputCastImageFilterType::New();
- caster3->SetInput(andFilter->GetOutput());
- typename OutputImageType::Pointer output =caster3->GetOutput();
-
- // Output
- typedef itk::ImageFileWriter<OutputImageType> WriterType;
- typename WriterType::Pointer writer = WriterType::New();
- writer->SetFileName(m_ArgsInfo.output_arg);
- writer->SetInput(output);
- writer->Update();
-
- }
-
-
-}//end clitk
-
-#endif //#define clitkAndGenericFilter_txx